GenomeNet

Database: UniProt
Entry: Q88BM9_PSESM
LinkDB: Q88BM9_PSESM
Original site: Q88BM9_PSESM 
ID   Q88BM9_PSESM            Unreviewed;       111 AA.
AC   Q88BM9;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   27-MAR-2024, entry version 100.
DE   SubName: Full=Transcriptional regulator, PbsX family {ECO:0000313|EMBL:AAO59063.1};
GN   OrderedLocusNames=PSPTO_A0039 {ECO:0000313|EMBL:AAO59063.1};
OS   Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OG   Plasmid pDC3000A {ECO:0000313|EMBL:AAO59063.1,
OG   ECO:0000313|Proteomes:UP000002515}.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283 {ECO:0000313|EMBL:AAO59063.1, ECO:0000313|Proteomes:UP000002515};
RN   [1] {ECO:0000313|EMBL:AAO59063.1, ECO:0000313|Proteomes:UP000002515}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-871 / DC3000 {ECO:0000313|Proteomes:UP000002515};
RC   PLASMID=Plasmid pDC3000A {ECO:0000313|Proteomes:UP000002515};
RX   PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA   Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA   Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.,
RA   Zafar N., Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B.,
RA   Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V.,
RA   D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S.,
RA   Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B.,
RA   Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
RT   "The complete genome sequence of the Arabidopsis and tomato pathogen
RT   Pseudomonas syringae pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AE016855; AAO59063.1; -; Genomic_DNA.
DR   RefSeq; NP_808697.1; NC_004633.1.
DR   AlphaFoldDB; Q88BM9; -.
DR   KEGG; pst:PSPTO_A0039; -.
DR   PATRIC; fig|223283.9.peg.5861; -.
DR   eggNOG; COG1396; Bacteria.
DR   HOGENOM; CLU_066192_17_3_6; -.
DR   OrthoDB; 7349669at2; -.
DR   PhylomeDB; Q88BM9; -.
DR   Proteomes; UP000002515; Plasmid pDC3000A.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR46558:SF11; HTH-TYPE TRANSCRIPTIONAL REGULATOR ANSR; 1.
DR   PANTHER; PTHR46558; TRACRIPTIONAL REGULATORY PROTEIN-RELATED-RELATED; 1.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Plasmid {ECO:0000313|EMBL:AAO59063.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002515}.
FT   DOMAIN          6..60
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   111 AA;  12478 MW;  5C30B6F4B257D981 CRC64;
     MVGAKIKALR KSTTLSQADL AEMIGCDAPL VSRYERGSTL PGIEQLIRIA TVFNVAPGEL
     LPGGQDVLRT RLLSLRQEIT ERIAEVDSPE YLEEMLNFIN RYPQYDNKNK K
//
DBGET integrated database retrieval system