ID Q88H52_PSEPK Unreviewed; 284 AA.
AC Q88H52;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 126.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAN69114.1};
GN OrderedLocusNames=PP_3513 {ECO:0000313|EMBL:AAN69114.1};
OS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950
OS / KT2440).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=160488 {ECO:0000313|EMBL:AAN69114.1, ECO:0000313|Proteomes:UP000000556};
RN [1] {ECO:0000313|EMBL:AAN69114.1, ECO:0000313|Proteomes:UP000000556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440
RC {ECO:0000313|Proteomes:UP000000556};
RX PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R.,
RA Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P.,
RA Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M.,
RA Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D.,
RA Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N.,
RA Dusterhoft A., Tummler B., Fraser C.M.;
RT "Complete genome sequence and comparative analysis of the metabolically
RT versatile Pseudomonas putida KT2440.";
RL Environ. Microbiol. 4:799-808(2002).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; AE015451; AAN69114.1; -; Genomic_DNA.
DR RefSeq; NP_745650.1; NC_002947.4.
DR RefSeq; WP_010954371.1; NC_002947.4.
DR AlphaFoldDB; Q88H52; -.
DR STRING; 160488.PP_3513; -.
DR PaxDb; 160488-PP_3513; -.
DR GeneID; 83679779; -.
DR KEGG; ppu:PP_3513; -.
DR PATRIC; fig|160488.4.peg.3737; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_35_0_6; -.
DR OrthoDB; 196624at2; -.
DR PhylomeDB; Q88H52; -.
DR BioCyc; PPUT160488:G1G01-3749-MONOMER; -.
DR Proteomes; UP000000556; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF90; LYSR FAMILY TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000556};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..60
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 284 AA; 31044 MW; 17500AFDCA100274 CRC64;
MRYSPEALVA FTEAASLGSF SAAARKLRKS QSTVSIAIAN FEADIGCPLF DRNGRHPTLN
EAGRQVLSHV EAILEASAQL DALAVRLAQN VEALVSVVMS DSYSVTFQGA VMTRFAQHYP
HTELRCGPAE DADVIEMIQQ GLAHVGILAT QPGYPADVAV ARLPEQAEFG VYVASEHPLA
SLPQVQAQHL ENARQLYIKT YAPSLHHGRG QAWSAPDYLT LLEFAVRGFG WAELPRALVK
RFGNELVELQ IAGYPRRVDM DVAWSSRRAL GPAGQWLVRQ MLGQ
//