ID Q8L643_ARATH Unreviewed; 613 AA.
AC Q8L643;
DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2002, sequence version 1.
DT 27-MAR-2024, entry version 136.
DE SubName: Full=RNA polymerase I specific transcription initiation factor RRN3 protein {ECO:0000313|EMBL:AEC09018.1};
GN OrderedLocusNames=At2g34750 {ECO:0000313|EMBL:AEC09018.1};
GN ORFNames=T29F13.4 {ECO:0000313|EMBL:AEC09018.1}, T29F13_4
GN {ECO:0000313|EMBL:AEC09018.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAM20140.1};
RN [1] {ECO:0000313|EMBL:AEC09018.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|EMBL:AAM20140.1}
RP NUCLEOTIDE SEQUENCE.
RA Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M.,
RA Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M.,
RA Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P., Chen H., Cheuk R.,
RA Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M.,
RA Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT "Arabidopsis Full Length cDNA Clones.";
RL Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAN13210.1}
RP NUCLEOTIDE SEQUENCE.
RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W.,
RA Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C.,
RA Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y.,
RA Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M.,
RA Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A.,
RA Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT "Arabidopsis Open Reading Frame (ORF) Clones.";
RL Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEC09018.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AEC09018.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the RRN3 family.
CC {ECO:0000256|ARBA:ARBA00010098}.
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DR EMBL; AY096642; AAM20140.1; -; mRNA.
DR EMBL; AY142672; AAN13210.1; -; mRNA.
DR EMBL; CP002685; AEC09018.1; -; Genomic_DNA.
DR RefSeq; NP_850236.1; NM_179905.4.
DR SMR; Q8L643; -.
DR IntAct; Q8L643; 1.
DR STRING; 3702.Q8L643; -.
DR PaxDb; 3702-AT2G34750-1; -.
DR ProteomicsDB; 183727; -.
DR EnsemblPlants; AT2G34750.1; AT2G34750.1; AT2G34750.
DR GeneID; 818040; -.
DR Gramene; AT2G34750.1; AT2G34750.1; AT2G34750.
DR KEGG; ath:AT2G34750; -.
DR TAIR; AT2G34750; -.
DR eggNOG; KOG2434; Eukaryota.
DR HOGENOM; CLU_010579_4_0_1; -.
DR OMA; VCSPAIV; -.
DR OrthoDB; 227969at2759; -.
DR Proteomes; UP000006548; Chromosome 2.
DR GO; GO:0001181; F:RNA polymerase I general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006361; P:transcription initiation at RNA polymerase I promoter; IEA:InterPro.
DR InterPro; IPR007991; RNA_pol_I_trans_ini_fac_RRN3.
DR PANTHER; PTHR12790:SF0; RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATED; 1.
DR PANTHER; PTHR12790; TRANSCRIPTION INITIATION FACTOR IA RRN3; 1.
DR Pfam; PF05327; RRN3; 1.
PE 1: Evidence at protein level;
KW Initiation factor {ECO:0000313|EMBL:AEC09018.1};
KW Protein biosynthesis {ECO:0000313|EMBL:AEC09018.1};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q8L643,
KW ECO:0007829|ProteomicsDB:Q8L643};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT REGION 586..613
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 586..601
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 69046 MW; C070ED2F6F392F6A CRC64;
MGAVELMSDP SSLCTVENYV DNVDLSDTQL VQTVRKALTS VKTGDSDLYS EMVGVMARDI
KEFKDPDVVA QLETVLKALS GAVACIDVLH HQKLLSALFR MKLWDHRPDV MDALVNLVIS
LAVTSGKYLD SCLNMLVSNF VPPPWVVNNL SHSRILNKKI DVLSRVHAAL LKISILVPLT
PSRLVPMLFQ QMPKMHKKDH SIVIYVESLL KLENSSIGQV GGSMILGMVM ERLRDLDLEI
EWDDIPQDDS SRGMFDMELE DAAEGTMNDG DELPVGPLKQ DTSDGSIVSK LLDKLMVVAF
EHLESCQNDG RLDQVFESLF KSFENFILNT YKSKFTQFLI FYACSLDPEN CGVKFASKLV
EIFLSSNKHV ATRMSAVAYL ASFLARGKFL PVSFVASMLK RLIDECVGYC RTCNDDTRPE
AHQIFFSGCQ AIMYVLCFRM RSILDVPRFR SQLTPLESIL MHKLNPLMVC LPSVVAEFLR
QAKEGGLFIV SDSFIFDDLL ESELSRAFGG FERLDTFFPF DPCLLKSSNS FISPNFIYWS
MVKATYDEDD DDNDAEVIVN GDEDSDEDDE ADLDYALNKM SITPKHSFKN KMERDRLLRM
PSRIRPSTSP ESL
//
