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Database: UniProt
Entry: Q8L9X1_ARATH
LinkDB: Q8L9X1_ARATH
Original site: Q8L9X1_ARATH 
ID   Q8L9X1_ARATH            Unreviewed;       252 AA.
AC   Q8L9X1; A0A178UC20;
DT   01-OCT-2002, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2002, sequence version 1.
DT   24-JAN-2024, entry version 147.
DE   SubName: Full=Alpha/beta-Hydrolases superfamily protein {ECO:0000313|EMBL:AED92787.1};
DE   SubName: Full=Putative lysophospholipase {ECO:0000313|EMBL:AAM65714.1};
DE   SubName: Full=Uncharacterized protein At5g20060 {ECO:0000313|EMBL:AAN17405.1};
GN   OrderedLocusNames=At5g20060 {ECO:0000313|EMBL:AED92787.1};
GN   ORFNames=F28I16.210 {ECO:0000313|EMBL:AED92787.1}, F28I16_210
GN   {ECO:0000313|EMBL:AED92787.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AAM65714.1};
RN   [1] {ECO:0000313|EMBL:AED92787.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA   Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA   Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA   Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA   Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA   Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA   Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:AAM65714.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12093376;
RA   Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N.,
RA   Feldmann K.A., Flavell R.B., White O., Salzberg S.L.;
RT   "Full-length messenger RNA sequences greatly improve genome annotation.";
RL   Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002).
RN   [3] {ECO:0000313|EMBL:AAM65714.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.;
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:AAN17405.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Southwick A., Nguyen M., Tripp M., Palm C.J., Jones T., Wu T., Carninci P.,
RA   Chen H., Cheuk R., Chan M.M., Chang C.H., Dale J.M., Deng J.M.,
RA   Hayashizaki Y., Hsuan V.W., Lee J.M., Ishida J., Kamiya A., Kawai J.,
RA   Kim C.J., Narusaka M., Quach H.L., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Tang C.C., Toroumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RL   Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AAN65062.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Tripp M., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R.,
RA   Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J.,
RA   Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M.,
RA   Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RL   Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AAM65714.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.;
RT   "Features of Arabidopsis genes and genome discovered using full-length
RT   cDNAs.";
RL   Plant Mol. Biol. 60:71-87(2006).
RN   [7] {ECO:0000313|EMBL:AED92787.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [8] {ECO:0007829|PubMed:22223895}
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22223895; DOI=10.1074/mcp.M111.015131;
RA   Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T.,
RA   Giglione C.;
RT   "Comparative large-scale characterisation of plant vs. mammal proteins
RT   reveals similar and idiosyncratic N-alpha acetylation features.";
RL   Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
RN   [9] {ECO:0000313|EMBL:AED92787.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA   Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [10] {ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
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DR   EMBL; AY088171; AAM65714.1; -; mRNA.
DR   EMBL; BT000428; AAN17405.1; -; mRNA.
DR   EMBL; BT001175; AAN65062.1; -; mRNA.
DR   EMBL; CP002688; AED92787.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED92788.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED92789.1; -; Genomic_DNA.
DR   EMBL; CP002688; ANM70209.1; -; Genomic_DNA.
DR   RefSeq; NP_001031909.1; NM_001036832.1.
DR   RefSeq; NP_001331839.1; NM_001343636.1.
DR   RefSeq; NP_197506.1; NM_122013.4.
DR   RefSeq; NP_974815.1; NM_203086.3.
DR   AlphaFoldDB; Q8L9X1; -.
DR   SMR; Q8L9X1; -.
DR   IntAct; Q8L9X1; 1.
DR   STRING; 3702.Q8L9X1; -.
DR   ESTHER; arath-AT5G20060; LYsophospholipase_carboxylesterase.
DR   MEROPS; S09.A56; -.
DR   PaxDb; 3702-AT5G20060-2; -.
DR   ProteomicsDB; 185859; -.
DR   EnsemblPlants; AT5G20060.1; AT5G20060.1; AT5G20060.
DR   EnsemblPlants; AT5G20060.2; AT5G20060.2; AT5G20060.
DR   EnsemblPlants; AT5G20060.3; AT5G20060.3; AT5G20060.
DR   EnsemblPlants; AT5G20060.4; AT5G20060.4; AT5G20060.
DR   GeneID; 832128; -.
DR   Gramene; AT5G20060.1; AT5G20060.1; AT5G20060.
DR   Gramene; AT5G20060.2; AT5G20060.2; AT5G20060.
DR   Gramene; AT5G20060.3; AT5G20060.3; AT5G20060.
DR   Gramene; AT5G20060.4; AT5G20060.4; AT5G20060.
DR   KEGG; ath:AT5G20060; -.
DR   TAIR; AT5G20060; -.
DR   eggNOG; KOG2112; Eukaryota.
DR   HOGENOM; CLU_049413_0_0_1; -.
DR   OMA; SWFDIAN; -.
DR   OrthoDB; 4670340at2759; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q8L9X1; baseline and differential.
DR   GO; GO:0009536; C:plastid; HDA:TAIR.
DR   GO; GO:0016787; F:hydrolase activity; IEA:InterPro.
DR   Gene3D; 3.40.50.1820; alpha/beta hydrolase; 1.
DR   InterPro; IPR029058; AB_hydrolase.
DR   InterPro; IPR003140; PLipase/COase/thioEstase.
DR   PANTHER; PTHR46234; ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN; 1.
DR   PANTHER; PTHR46234:SF9; ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN; 1.
DR   Pfam; PF02230; Abhydrolase_2; 1.
DR   SUPFAM; SSF53474; alpha/beta-Hydrolases; 1.
PE   1: Evidence at protein level;
KW   Proteomics identification {ECO:0007829|PeptideAtlas:Q8L9X1,
KW   ECO:0007829|ProteomicsDB:Q8L9X1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT   DOMAIN          23..244
FT                   /note="Phospholipase/carboxylesterase/thioesterase"
FT                   /evidence="ECO:0000259|Pfam:PF02230"
SQ   SEQUENCE   252 AA;  26728 MW;  FFE2B123185896BE CRC64;
     MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN
     IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG LDVAAAHVAN LLSNEPADIK
     LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI
     KNRAASLPIV VCHGKADDVV PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL
     CAWLTSTLSL EG
//
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