ID POLL1_ARATH Reviewed; 813 AA.
AC Q8VZM7; Q94AC5; Q9LYZ1;
DT 25-JAN-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 24-JAN-2024, entry version 115.
DE RecName: Full=Putative ion channel POLLUX-like 1;
GN OrderedLocusNames=At5g02940; ORFNames=F9G14.250;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the castor/pollux (TC 1.A.1.23) family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB86048.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL162973; CAB86048.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED90538.1; -; Genomic_DNA.
DR EMBL; AY048284; AAK82546.1; -; mRNA.
DR EMBL; AY064004; AAL36360.1; -; mRNA.
DR PIR; T48315; T48315.
DR RefSeq; NP_195914.2; NM_120372.5.
DR AlphaFoldDB; Q8VZM7; -.
DR SMR; Q8VZM7; -.
DR STRING; 3702.Q8VZM7; -.
DR PaxDb; 3702-AT5G02940-1; -.
DR ProteomicsDB; 236580; -.
DR EnsemblPlants; AT5G02940.1; AT5G02940.1; AT5G02940.
DR GeneID; 831426; -.
DR Gramene; AT5G02940.1; AT5G02940.1; AT5G02940.
DR KEGG; ath:AT5G02940; -.
DR Araport; AT5G02940; -.
DR TAIR; AT5G02940; -.
DR eggNOG; ENOG502QW0U; Eukaryota.
DR HOGENOM; CLU_011206_0_0_1; -.
DR InParanoid; Q8VZM7; -.
DR OMA; RCANHIP; -.
DR PhylomeDB; Q8VZM7; -.
DR PRO; PR:Q8VZM7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8VZM7; baseline and differential.
DR Genevisible; Q8VZM7; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0042170; C:plastid membrane; IDA:TAIR.
DR GO; GO:0006813; P:potassium ion transport; IEA:InterPro.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR InterPro; IPR044849; CASTOR/POLLUX/SYM8-like.
DR InterPro; IPR010420; CASTOR/POLLUX/SYM8_dom.
DR InterPro; IPR036721; RCK_C_sf.
DR PANTHER; PTHR31563:SF13; ION CHANNEL POLLUX-LIKE 1-RELATED; 1.
DR PANTHER; PTHR31563; ION CHANNEL POLLUX-RELATED; 1.
DR Pfam; PF06241; Castor_Poll_mid; 1.
DR SUPFAM; SSF116726; TrkA C-terminal domain-like; 1.
DR SUPFAM; SSF81324; Voltage-gated potassium channels; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..813
FT /note="Putative ion channel POLLUX-like 1"
FT /id="PRO_0000415274"
FT TRANSMEM 161..181
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 216..236
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 31
FT /note="L -> W (in Ref. 3; AAK82546)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 813 AA; 92138 MW; 6A9BB125DF38E079 CRC64;
MVAVQLFTWK PLILPSQALT RDRLASFHRS LSLHSLPLGG IKSSSFRGTF KVKSQRTGDT
EPPNKNFKDL NSKFYKSLPY KLVIGCIPLY AVLRIAQKIF QELPNLIQNS VKAGLPFACA
SNAIDKHPLL KAIPSSHDIK WGLARSSYLF NTQLEKNLGT VFVVLLITCF SFVIIGGLFF
FKFRKDTSLE DCLWEAWACL VNADTHLEQK TRFERLIGFV LAIWGIVFYS RLLSTMTEQF
RYHMKKVREG AHMQVLESDH IIICGINSHL PFILKQLNSY QQHAVRLGTT TARKQTLLLM
SDTPRKEMDK LAEAYAKDFD QLDILTKSCS LNMTKSFERA AACMARAIII LPTKGDRYEV
DTDAFLSVLA LEPIQKMESI PTIVEVSSSN MYDLLKSISG LKVEPVENST SKLFVQCSRQ
KDLIKIYRHL LNYSKNVFNL CSFPNLTGMK YRQLRLGFQE VVVCGILRDG KVNFHPNDDE
ELMETDKLLF IAPLKKDFLY TDMKTENMTV DETDDTRKQV YEEKKSRLEK IITRPSKSLS
KGSDSFKGPK ESILLLGWRG DVVNMIKEFD SYLGPGSSLE ILSDVPLEDR RGVDQSIATG
KIKNIQVSHS VGNHMDYDTL KESIMHMQNK YEKGEEDIRL TIVVISDRDL LLGDPSRADK
QSAYTLLLAE TICNKLGVKV HNLASEIVDT KLGKQITRLK PSLTFIAAEE VMSLVTAQVA
ENSELNEVWK DILDAEGDEI YVKDIELYMK EGENPSFTEL SERAWLRREV AIGYIKGGKK
IINPVPKTEP VSLEMEDSLI VISELEGDQV ITL
//
