ID Q8XPD9_CLOPE Unreviewed; 386 AA.
AC Q8XPD9;
DT 01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2002, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE RecName: Full=L,D-transpeptidase catalytic domain-containing protein {ECO:0000259|Pfam:PF03734};
GN OrderedLocusNames=CPE0024 {ECO:0000313|EMBL:BAB79730.1};
OS Clostridium perfringens (strain 13 / Type A).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=195102 {ECO:0000313|EMBL:BAB79730.1, ECO:0000313|Proteomes:UP000000818};
RN [1] {ECO:0000313|EMBL:BAB79730.1, ECO:0000313|Proteomes:UP000000818}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13 / Type A {ECO:0000313|Proteomes:UP000000818};
RX PubMed=11792842; DOI=10.1073/pnas.022493799;
RA Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T.,
RA Ogasawara N., Hattori M., Kuhara S., Hayashi H.;
RT "Complete genome sequence of Clostridium perfringens, an anaerobic flesh-
RT eater.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002).
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
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DR EMBL; BA000016; BAB79730.1; -; Genomic_DNA.
DR RefSeq; WP_011009575.1; NC_003366.1.
DR AlphaFoldDB; Q8XPD9; -.
DR STRING; 195102.gene:10489252; -.
DR KEGG; cpe:CPE0024; -.
DR HOGENOM; CLU_699630_0_0_9; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000000818; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000818};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 264..385
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 386 AA; 44233 MW; AF5C2823FBB36CF7 CRC64;
MKNKKLLISI SSTILILLII IVAYFILSFS NNLNKFKEDL ALNNYEAASN CFNNGTKNII
LRKTFLKSSD SVIIEKLSEI ENDYYSGDIS EEETVEDLNG LLSLNTSNEE ILNFKNTLPL
IKDSKDSFDI GISKLDEENY LEALNYFKSV HNLSDCKAQA LEYEETCLDK IREPILETVD
EYISNEKYSK GIEYLDSKIN SLPDDPKLQK KRDELENLRL EHLEDYSQKN IDKATARTAP
VMEYYKKLNE DTINQFDITS NTNYLVFVNI AEQKTYVYEG SKNDWTLDKT FTCSTGIEGK
ETPVGVFTVQ NRAPWFFSPK YGQGGKYYVQ FMGNYLFHSI PFDSDKTTVS DPTLGVPSSH
GCIRLSVEDS KWLYDNVQNG SKIIIY
//
