ID Q8ZQ04_SALTY Unreviewed; 211 AA.
AC Q8ZQ04;
DT 01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2002, sequence version 1.
DT 27-MAR-2024, entry version 123.
DE SubName: Full=Transcriptional repressor (TetR/AcrR family) {ECO:0000313|EMBL:AAL20142.1};
GN Name=ycfQ {ECO:0000313|EMBL:AAL20142.1};
GN OrderedLocusNames=STM1213 {ECO:0000313|EMBL:AAL20142.1};
OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=99287 {ECO:0000313|EMBL:AAL20142.1, ECO:0000313|Proteomes:UP000001014};
RN [1] {ECO:0000313|EMBL:AAL20142.1, ECO:0000313|Proteomes:UP000001014}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LT2 / SGSC1412 / ATCC 700720
RC {ECO:0000313|Proteomes:UP000001014};
RX PubMed=11677609; DOI=10.1038/35101614;
RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P.,
RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D.,
RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E.,
RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R.,
RA Wilson R.K.;
RT "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
RL Nature 413:852-856(2001).
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DR EMBL; AE006468; AAL20142.1; -; Genomic_DNA.
DR RefSeq; NP_460183.1; NC_003197.2.
DR RefSeq; WP_000205990.1; NC_003197.2.
DR AlphaFoldDB; Q8ZQ04; -.
DR STRING; 99287.STM1213; -.
DR PaxDb; 99287-STM1213; -.
DR GeneID; 1252731; -.
DR KEGG; stm:STM1213; -.
DR PATRIC; fig|99287.12.peg.1282; -.
DR HOGENOM; CLU_069356_28_0_6; -.
DR OMA; IQGMSQQ; -.
DR PhylomeDB; Q8ZQ04; -.
DR BioCyc; SENT99287:STM1213-MONOMER; -.
DR Proteomes; UP000001014; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR PANTHER; PTHR47506:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR YJDC; 1.
DR PANTHER; PTHR47506; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00440; TetR_N; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR PROSITE; PS50977; HTH_TETR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00335}; Reference proteome {ECO:0000313|Proteomes:UP000001014}.
FT DOMAIN 18..78
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 41..60
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ SEQUENCE 211 AA; 23693 MW; DE945085828989EC CRC64;
MTTDTTSCAK KSRGRPKVFD REAALDKAMT LFWQHGYEAT SLADLVEATG AKAPTLYAEF
TNKKGLFRAV LDRYITRFAS KHEAQLFCEE KSVESALEDY FTEIAACFTS TDTPAGCFMI
NTSATLAASS RDIARTVKSR HAMQEQTLIQ FLRQRQERGE IPAHCNPQAL AEYINCILQG
MSISAREGAT FEQLMQITRT TLRIWPELIK S
//
