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Database: UniProt
Entry: Q92U64_RHIME
LinkDB: Q92U64_RHIME
Original site: Q92U64_RHIME 
ID   Q92U64_RHIME            Unreviewed;       698 AA.
AC   Q92U64;
DT   01-DEC-2001, integrated into UniProtKB/TrEMBL.
DT   01-DEC-2001, sequence version 1.
DT   24-JAN-2024, entry version 126.
DE   SubName: Full=Isoamylase {ECO:0000313|EMBL:CAC49675.1};
DE            EC=3.2.1.68 {ECO:0000313|EMBL:CAC49675.1};
GN   Name=glgX2 {ECO:0000313|EMBL:CAC49675.1};
GN   ORFNames=SM_b21446 {ECO:0000313|EMBL:CAC49675.1};
OS   Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium
OS   meliloti).
OG   Plasmid pSymB {ECO:0000313|EMBL:CAC49675.1,
OG   ECO:0000313|Proteomes:UP000001976}.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=266834 {ECO:0000313|EMBL:CAC49675.1, ECO:0000313|Proteomes:UP000001976};
RN   [1] {ECO:0000313|EMBL:CAC49675.1, ECO:0000313|Proteomes:UP000001976}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=1021 {ECO:0000313|EMBL:CAC49675.1,
RC   ECO:0000313|Proteomes:UP000001976};
RC   PLASMID=Plasmid pSymB {ECO:0000313|Proteomes:UP000001976};
RX   PubMed=11481431; DOI=10.1073/pnas.161294698;
RA   Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorholter F.J.,
RA   Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puhler A.;
RT   "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing
RT   endosymbiont Sinorhizobium meliloti.";
RL   Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001).
RN   [2] {ECO:0000313|Proteomes:UP000001976}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=1021 {ECO:0000313|Proteomes:UP000001976};
RC   PLASMID=Plasmid pSymB {ECO:0000313|Proteomes:UP000001976};
RX   PubMed=11474104; DOI=10.1126/science.1060966;
RA   Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F.,
RA   Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G.,
RA   Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P.,
RA   Cowie A., Davis R.W., Dreano S., Federspiel N.A., Fisher R.F., Gloux S.,
RA   Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M., Hernandez-Lucas I.,
RA   Hong A., Huizar L., Hyman R.W., Jones T., Kahn D., Kahn M.L., Kalman S.,
RA   Keating D.H., Kiss E., Komp C., Lelaure V., Masuy D., Palm C., Peck M.C.,
RA   Pohl T.M., Portetelle D., Purnelle B., Ramsperger U., Surzycki R.,
RA   Thebault P., Vandenbol M., Vorhoelter F.J., Weidner S., Wells D.H.,
RA   Wong K., Yeh K.-C., Batut J.;
RT   "The composite genome of the legume symbiont Sinorhizobium meliloti.";
RL   Science 293:668-672(2001).
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC       {ECO:0000256|ARBA:ARBA00008061}.
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DR   EMBL; AL591985; CAC49675.1; -; Genomic_DNA.
DR   PIR; C96001; C96001.
DR   RefSeq; NP_437815.1; NC_003078.1.
DR   RefSeq; WP_010976095.1; NC_003078.1.
DR   AlphaFoldDB; Q92U64; -.
DR   SMR; Q92U64; -.
DR   CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR   CAZy; GH13; Glycoside Hydrolase Family 13.
DR   EnsemblBacteria; CAC49675; CAC49675; SM_b21446.
DR   GeneID; 61601198; -.
DR   KEGG; sme:SM_b21446; -.
DR   PATRIC; fig|266834.11.peg.6195; -.
DR   eggNOG; COG1523; Bacteria.
DR   HOGENOM; CLU_011725_1_1_5; -.
DR   OMA; HAFVNDQ; -.
DR   OrthoDB; 3236218at2; -.
DR   Proteomes; UP000001976; Plasmid pSymB.
DR   GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR   GO; GO:0019156; F:isoamylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR   CDD; cd11326; AmyAc_Glg_debranch; 1.
DR   CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR004193; Glyco_hydro_13_N.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR011837; Glycogen_debranch_GlgX.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR014756; Ig_E-set.
DR   NCBIfam; TIGR02100; glgX_debranch; 1.
DR   PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR   PANTHER; PTHR43002:SF3; ISOAMYLASE 3, CHLOROPLASTIC; 1.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   Pfam; PF02922; CBM_48; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE   3: Inferred from homology;
KW   Glycosidase {ECO:0000313|EMBL:CAC49675.1};
KW   Hydrolase {ECO:0000313|EMBL:CAC49675.1};
KW   Plasmid {ECO:0000313|EMBL:CAC49675.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001976}.
FT   DOMAIN          163..571
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
FT   REGION          471..499
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        471..487
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   698 AA;  78354 MW;  4E1B4DB41E5A700C CRC64;
     MNLTFSELDF MKPELGAEYT GQGTHFAVFS AHAEKIELCL FSEDGREETA RMPLPKREGD
     IWSGYIEGIG PGTLYGYRAH GPYDPHNGHR FNPNKLLLDP YAKLVAGDLI WDDALFGYTI
     GSPEGDLSFD ERDSAPFMVK GVVQDPTFDW AGEEAIRRPW TETIIYESHV RGMTMTHPGV
     PDELRGTFLG MASDPIIEHL TKLGVSAIEL MPVQYFLDDR YLVERNLRNY WGYQTLGFFA
     PHDRYLKGDR FTEFKTMVKR FHSVGIEVLM DVVYNHTAEG SERGPTLSFR GLDNFSYYRQ
     SPDKPRHTYD TTGTGNTLNV AHPLVLRMVL DSLRYWVGVM HIDGFRFDLA STLGREYMEF
     DREGGFFDAI RQDPILAGVK LIAEPWDVGE GGYQLGGFPP PFREWNDRFR DDVRRFWKGD
     GGMVPVLAER ILGSPVQFRH SDRAATSSIN LVSAHDGFTL MDTVSYGEKH NEANGEENRD
     GHSDNHSDNM GAEGPTDNRE IIEARKRRRA AMLATLMISQ GVPMVLGGDE LGNSQQGNNN
     AYCQDNEIGW LDWSGADDGF VDFCRKLLAF RKDRPVLRQE RFLDGEPDEN GRVEIAWYKA
     DGSPMDEDAW HDAELRLICA YICRAGQGEA PPAGEIVLVL NAGGDCEIAL PHGNGSRRWL
     RVLDTAADEP FGMRASADRD TIPAQSVVAF VPQEGSNG
//
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