ID Q9FHC7_ARATH Unreviewed; 397 AA.
AC Q9FHC7; A0A178UKB2;
DT 01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 150.
DE SubName: Full=At5g52330 {ECO:0000313|EMBL:ABO09878.1};
DE SubName: Full=Similarity to unknown protein {ECO:0000313|EMBL:BAB10530.1};
DE SubName: Full=TRAF-like superfamily protein {ECO:0000313|EMBL:AED96201.1};
GN OrderedLocusNames=At5g52330 {ECO:0000313|EMBL:AED96201.1};
GN ORFNames=K24M7.6 {ECO:0000313|EMBL:AED96201.1}, K24M7_6
GN {ECO:0000313|EMBL:AED96201.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB10530.1};
RN [1] {ECO:0000313|EMBL:BAB10530.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2] {ECO:0000313|EMBL:AED96201.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3] {ECO:0000313|EMBL:ABO09878.1}
RP NUCLEOTIDE SEQUENCE.
RA Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AED96201.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AED96201.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; BT030314; ABO09878.1; -; mRNA.
DR EMBL; CP002688; AED96201.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM69978.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM69979.1; -; Genomic_DNA.
DR EMBL; AB019226; BAB10530.1; -; Genomic_DNA.
DR RefSeq; NP_001331622.1; NM_001344994.1.
DR RefSeq; NP_001331623.1; NM_001344995.1.
DR RefSeq; NP_200046.1; NM_124612.3.
DR AlphaFoldDB; Q9FHC7; -.
DR SMR; Q9FHC7; -.
DR STRING; 3702.Q9FHC7; -.
DR PaxDb; 3702-AT5G52330-1; -.
DR ProteomicsDB; 181324; -.
DR EnsemblPlants; AT5G52330.1; AT5G52330.1; AT5G52330.
DR EnsemblPlants; AT5G52330.3; AT5G52330.3; AT5G52330.
DR EnsemblPlants; AT5G52330.4; AT5G52330.4; AT5G52330.
DR GeneID; 835309; -.
DR Gramene; AT5G52330.1; AT5G52330.1; AT5G52330.
DR Gramene; AT5G52330.3; AT5G52330.3; AT5G52330.
DR Gramene; AT5G52330.4; AT5G52330.4; AT5G52330.
DR TAIR; AT5G52330; -.
DR eggNOG; ENOG502QW6P; Eukaryota.
DR HOGENOM; CLU_048069_0_0_1; -.
DR OMA; QVQVIHE; -.
DR OrthoDB; 9211at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHC7; baseline and differential.
DR CDD; cd00121; MATH; 1.
DR InterPro; IPR002083; MATH/TRAF_dom.
DR InterPro; IPR008974; TRAF-like.
DR PANTHER; PTHR47477; TNF RECEPTOR-ASSOCIATED FACTOR HOMOLOG 1A; 1.
DR PANTHER; PTHR47477:SF5; TNF RECEPTOR-ASSOCIATED FACTOR HOMOLOG 1B-RELATED; 1.
DR Pfam; PF00917; MATH; 1.
DR SMART; SM00061; MATH; 1.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR PROSITE; PS50144; MATH; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9FHC7,
KW ECO:0007829|ProteomicsDB:Q9FHC7};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 18..141
FT /note="MATH"
FT /evidence="ECO:0000259|PROSITE:PS50144"
SQ SEQUENCE 397 AA; 46774 MW; DD60F9D2B7BEA9F0 CRC64;
MAKTDVDDEY GLKPSELYGK NTWKIKKFSQ ISKREFASSV FEIGGYSWHI LMYPEGCDVS
NHLSLFLCVA NHDELLPGWS QLAQFTISVM HKDPKKSKFS DTLHRFWKKE HDWGWKKFME
LPKLRDGFID DSGCLTIETK VQVIRDRVDR PFFLDYGYKT EIVRVYFRNI EQIFLRFVEE
RRSKLEKLIE DKAKWTSFGV FWLGMDKNSR REMSREKMDV ILKGFVKHFF MENVVTSPIA
MDCLYNGLKD LEVQTKNKKA SPKLLDDKEL PAPFVKVDRD MFVLVDDDVL LLLERAALLE
RAAPEPLPPK DDKALQNRIK EDKDEEDINK EAYEICLNEW GRRTVEIFVL DHIFSKIEVA
YKEAIALKRQ EELIREEEET SKRSKVLKKG FGKCRLN
//
