ID Q9FJ08_ARATH Unreviewed; 257 AA.
AC Q9FJ08;
DT 01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 120.
DE SubName: Full=At5g49320 {ECO:0000313|EMBL:AAR24682.1};
DE SubName: Full=Dbj|BAA84605.1 {ECO:0000313|EMBL:BAB10350.1};
DE SubName: Full=Transmembrane protein, putative (DUF1218) {ECO:0000313|EMBL:AED95796.1};
GN OrderedLocusNames=At5g49320 {ECO:0000313|Araport:AT5G49320,
GN ECO:0000313|EMBL:AED95796.1};
GN ORFNames=K21P3.22 {ECO:0000313|EMBL:AED95796.1}, K21P3_22
GN {ECO:0000313|EMBL:AED95796.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB10350.1};
RN [1] {ECO:0000313|EMBL:BAB10350.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [2] {ECO:0000313|EMBL:AED95796.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3] {ECO:0000313|EMBL:AAR24682.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AAS76225.1}
RP NUCLEOTIDE SEQUENCE.
RA Shinn P., Chen H., Cheuk R., Kim C.J., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AED95796.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:AED95796.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the DESIGUAL family.
CC {ECO:0000256|ARBA:ARBA00029467}.
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DR EMBL; BT010904; AAR24682.1; -; mRNA.
DR EMBL; BT012130; AAS76225.1; -; mRNA.
DR EMBL; CP002688; AED95796.1; -; Genomic_DNA.
DR EMBL; AB016872; BAB10350.1; -; Genomic_DNA.
DR RefSeq; NP_199743.1; NM_124309.4.
DR AlphaFoldDB; Q9FJ08; -.
DR PaxDb; 3702-AT5G49320-1; -.
DR EnsemblPlants; AT5G49320.1; AT5G49320.1; AT5G49320.
DR GeneID; 834992; -.
DR Gramene; AT5G49320.1; AT5G49320.1; AT5G49320.
DR KEGG; ath:AT5G49320; -.
DR Araport; AT5G49320; -.
DR TAIR; AT5G49320; -.
DR eggNOG; ENOG502QRFH; Eukaryota.
DR HOGENOM; CLU_073715_0_0_1; -.
DR OMA; CLIIREG; -.
DR OrthoDB; 1041851at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJ08; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR009606; DEAL/Modifying_wall_lignin1/2.
DR PANTHER; PTHR31769:SF2; OS01G0253400 PROTEIN; 1.
DR PANTHER; PTHR31769; OS07G0462200 PROTEIN-RELATED; 1.
DR Pfam; PF06749; DUF1218; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Transmembrane {ECO:0000256|SAM:Phobius, ECO:0000313|EMBL:AED95796.1};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 29..51
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 72..99
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 119..147
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 168..189
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 257 AA; 27883 MW; 53B85CC4ABDE13BC CRC64;
MSRTRVRAVT HQDLVPNPKT TDLSSKTGIF IAVLTIIFGL SCFVLCLYAE ATRSQATWGS
KTCVYNGSGK TPLLCGAIAF VGLAVAMVGF HMYLLIAVTT SPSLVLVEWD PDSVPAKRLT
FQAAFFFVST WVCFGVGEVL LLVALSVESG HLKNWSKPKP SCLVIRQGLF SAAGVFSLIT
VFLATGLYLT ALQAHRISKD LENTHREIIE ASVLYASPPR SPTNRMATVA REGLATVRDE
STSLEYLVSL KQLAHIV
//
