ID Q9FN23_ARATH Unreviewed; 596 AA.
AC Q9FN23;
DT 01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 144.
DE SubName: Full=CHP-rich zinc finger protein-like {ECO:0000313|EMBL:BAB10734.1};
DE SubName: Full=Cysteine/Histidine-rich C1 domain family protein {ECO:0000313|EMBL:AED96441.1};
GN OrderedLocusNames=At5g54040 {ECO:0000313|Araport:AT5G54040,
GN ECO:0000313|EMBL:AED96441.1};
GN ORFNames=K19P17.21 {ECO:0000313|EMBL:AED96441.1}, K19P17_21
GN {ECO:0000313|EMBL:AED96441.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB10734.1};
RN [1] {ECO:0000313|EMBL:BAB10734.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2] {ECO:0000313|EMBL:AED96441.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3] {ECO:0000313|EMBL:AED96441.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AED96441.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002688; AED96441.1; -; Genomic_DNA.
DR EMBL; AB007644; BAB10734.1; -; Genomic_DNA.
DR RefSeq; NP_200215.1; NM_124783.1.
DR AlphaFoldDB; Q9FN23; -.
DR STRING; 3702.Q9FN23; -.
DR PaxDb; 3702-AT5G54040-1; -.
DR ProteomicsDB; 183630; -.
DR EnsemblPlants; AT5G54040.1; AT5G54040.1; AT5G54040.
DR GeneID; 835487; -.
DR Gramene; AT5G54040.1; AT5G54040.1; AT5G54040.
DR KEGG; ath:AT5G54040; -.
DR Araport; AT5G54040; -.
DR TAIR; AT5G54040; -.
DR HOGENOM; CLU_014776_3_0_1; -.
DR OMA; CHACRVE; -.
DR OrthoDB; 686990at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FN23; baseline and differential.
DR Gene3D; 3.30.60.20; -; 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR PANTHER; PTHR32410:SF214; CHP-RICH ZINC FINGER PROTEIN-LIKE-RELATED; 1.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR Pfam; PF03107; C1_2; 5.
DR SUPFAM; SSF57889; Cysteine-rich domain; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 154..196
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
FT DOMAIN 206..256
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
FT DOMAIN 293..342
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
FT DOMAIN 410..452
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
FT DOMAIN 461..510
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
SQ SEQUENCE 596 AA; 68838 MW; 387BB5C6B19DE53B CRC64;
MTPDDFQLAT MPKLTVPFHD HPMSSSYCIF LESCSLCSFS KNSSWLRRSV TCISYECTDC
GLTLHKECVD HLFLNRPFLC NHVLKIYRNT FAWPDPDRKD DLSCHFCRRK LTSFFARLRN
LPSFFARCTI CNINVDKKCL MALGPPLAIF EPKHHEHSLT LLLRLVTFTC NACGVVDDRN
PYVCLECNLM VHKECVQNLP RVISINRHDH RISHTFHLGQ GEGDWECGVC RKTINWVYGG
YKCSRCPSYA VHSRCATRYE VWDGLELEDV PEEEEEIEDP FKVINEKGDI IHFSHEEHVL
RLDEIYVTDD ANMRCRCCVL AINGDPCYRC VECDFILHKA CANLPRKMRH LLHKHKLTLS
STGNRFLRCK ACDIKTNGFI YECLHEGCKS ISFTYDVRCS SVSEPFHHDL HQHPLYFTLE
KTNKCHACKR KIDWNPLNCT VCDDYSLCTR CAALPRKVKH RCDDHYLSLC QGVGSASGDL
WCDICETKTD PSVFYYTCDD CGLSLHIDCV LGDCYYTKVG CPGPRMEVHP NNGATRPICT
KCELRCKFPF FIKGTEEDLG IWYCSKDLCP KEFNFAVSPY RFALDIGLRD WDLRVF
//
