ID FDL4_ARATH Reviewed; 434 AA.
AC Q9FZ53;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 118.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At1g16940;
GN OrderedLocusNames=At1g16940; ORFNames=F6I1.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC051629; AAF99839.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29524.1; -; Genomic_DNA.
DR PIR; A86305; A86305.
DR RefSeq; NP_173138.1; NM_101555.1.
DR AlphaFoldDB; Q9FZ53; -.
DR STRING; 3702.Q9FZ53; -.
DR PaxDb; 3702-AT1G16940-1; -.
DR EnsemblPlants; AT1G16940.1; AT1G16940.1; AT1G16940.
DR GeneID; 838265; -.
DR Gramene; AT1G16940.1; AT1G16940.1; AT1G16940.
DR KEGG; ath:AT1G16940; -.
DR Araport; AT1G16940; -.
DR TAIR; AT1G16940; -.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q9FZ53; -.
DR OMA; SYFMANS; -.
DR OrthoDB; 646344at2759; -.
DR PhylomeDB; Q9FZ53; -.
DR PRO; PR:Q9FZ53; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FZ53; baseline and differential.
DR Genevisible; Q9FZ53; AT.
DR CDD; cd22160; F-box_AtFBL13-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR31900; F-BOX/RNI SUPERFAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR31900:SF30; PROTEIN WITH RNI-LIKE_FBD-LIKE DOMAIN; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..434
FT /note="Putative F-box/FBD/LRR-repeat protein At1g16940"
FT /id="PRO_0000283097"
FT DOMAIN 10..66
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 72..99
FT /note="LRR 1"
FT REPEAT 114..141
FT /note="LRR 2"
FT REPEAT 164..189
FT /note="LRR 3"
FT REPEAT 204..231
FT /note="LRR 4"
FT REPEAT 252..277
FT /note="LRR 5"
FT REPEAT 306..331
FT /note="LRR 6"
FT DOMAIN 336..385
FT /note="FBD"
SQ SEQUENCE 434 AA; 50571 MW; E465DB9F39DA2B54 CRC64;
MTFEEKRVGH NIINQLPDSL LCEIFFNLPT EEVVKTSLIC RRWRYVWQSL PGLDLVINGS
KNYDKFDFLE RFMFLQRVKL RYVGYGHNCR NMTSMMMNNV IKHKIQHLDV GSNRRYVYDR
VEIPPTIYTS CERLVFLKLH RANLPKSPDS VSLPCLKIMD LQKINFVDSL DMEKLVSVCP
ALETLTMDKM YGAKVSSQSL LSFCLTNNET GYLKTQVVMQ TPKLKYLKLN RQFIQRIVIN
DLSSIVMLNL DDVAYFGETL LSILKLISCV RDLTISFDIL QDYRHFSKSK SLPKFHKLSV
LSVKDMAVGS WESLLIFLES CQNLKSLVMG FRDYNWGINF SDVPQCVLSS LEFVEVKARE
VADMKKLWSY FMENSTVLKK FTLCLDHIED QRDHVMLSKL FTFPRRSNKC EVVVRLRTFG
TYKPMSMFSC ADGF
//
