ID Q9HNN5_HALSA Unreviewed; 176 AA.
AC Q9HNN5;
DT 01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=PadR family transcription regulator {ECO:0000313|EMBL:DAC78928.1};
GN OrderedLocusNames=VNG_2020C {ECO:0000313|EMBL:AAG20185.1};
OS Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
OS (Halobacterium halobium).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Halobacterium; Halobacterium salinarum NRC-34001.
OX NCBI_TaxID=64091 {ECO:0000313|EMBL:AAG20185.1, ECO:0000313|Proteomes:UP000000554};
RN [1] {ECO:0000313|EMBL:AAG20185.1, ECO:0000313|Proteomes:UP000000554}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700922 / JCM 11081 / NRC-1
RC {ECO:0000313|Proteomes:UP000000554}, and NRC-1
RC {ECO:0000313|EMBL:AAG20185.1};
RX PubMed=11016950; DOI=10.1073/pnas.190337797;
RA Ng W.V., Kennedy S.P., Mahairas G.G., Berquist B., Pan M., Shukla H.D.,
RA Lasky S.R., Baliga N.S., Thorsson V., Sbrogna J., Swartzell S., Weir D.,
RA Hall J., Dahl T.A., Welti R., Goo Y.A., Leithauser B., Keller K., Cruz R.,
RA Danson M.J., Hough D.W., Maddocks D.G., Jablonski P.E., Krebs M.P.,
RA Angevine C.M., Dale H., Isenbarger T.A., Peck R.F., Pohlschroder M.,
RA Spudich J.L., Jung K.W., Alam M., Freitas T., Hou S., Daniels C.J.,
RA Dennis P.P., Omer A.D., Ebhardt H., Lowe T.M., Liang P., Riley M., Hood L.,
RA DasSarma S.;
RT "Genome sequence of Halobacterium species NRC-1.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:12176-12181(2000).
RN [2] {ECO:0000313|EMBL:DAC78928.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NRC-1 {ECO:0000313|EMBL:DAC78928.1};
RX PubMed=18313895; DOI=.1016/j.ygeno.2008.01.001;
RA Pfeiffer F., Schuster S.C., Broicher A., Falb M., Palm P., Rodewald K.,
RA Ruepp A., Soppa J., Tittor J., Oesterhelt D.;
RT "Evolution in the laboratory: the genome of Halobacterium salinarum strain
RT R1 compared to that of strain NRC-1.";
RL Genomics 91:335-346(2008).
RN [3] {ECO:0000313|EMBL:DAC78928.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NRC-1 {ECO:0000313|EMBL:DAC78928.1};
RX PubMed=26042526;
RA Pfeiffer F., Oesterhelt D.;
RT "A manual curation strategy to improve genome annotation: application to a
RT set of haloarchael genomes.";
RL Life 5:1427-1444(2015).
RN [4] {ECO:0000313|EMBL:DAC78928.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NRC-1 {ECO:0000313|EMBL:DAC78928.1};
RA Pfeiffer F., Marchfelder A., Habermann B.H., Dyall-Smith M.;
RT "The genome of the Halobacterium salinarum type strain is closely related
RT to that of the laboratory strains NRC-1 and R1.";
RL Microbiol. Resour. Announc. 0:0-0(2019).
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DR EMBL; AE004437; AAG20185.1; -; Genomic_DNA.
DR EMBL; BK010829; DAC78928.1; -; Genomic_DNA.
DR PIR; E84352; E84352.
DR RefSeq; WP_010903486.1; NC_002607.1.
DR AlphaFoldDB; Q9HNN5; -.
DR STRING; 64091.VNG_2020C; -.
DR PaxDb; 64091-VNG_2020C; -.
DR GeneID; 68694610; -.
DR KEGG; hal:VNG_2020C; -.
DR PATRIC; fig|64091.14.peg.1542; -.
DR HOGENOM; CLU_1418669_0_0_2; -.
DR OrthoDB; 56053at2157; -.
DR Proteomes; UP000000554; Chromosome.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005149; Tscrpt_reg_PadR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43252; TRANSCRIPTIONAL REGULATOR YQJI; 1.
DR PANTHER; PTHR43252:SF2; TRANSCRIPTIONAL REGULATOR, PADR-LIKE FAMILY; 1.
DR Pfam; PF03551; PadR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000554}.
FT DOMAIN 15..86
FT /note="Transcription regulator PadR N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03551"
SQ SEQUENCE 176 AA; 20280 MW; 6D021C9C46E105EB CRC64;
MRKSGPPKGL VSYLVLELLD EQPRYGYEIL KEIESLSGGH WEPSYGSVYP ILYKFEENGY
AERLDVEDEP DRKYFELTDA GREELAAKRE EVGTAGTDLF DVILGFYHMF AVLGTDDRFD
VENPPEGTGW RFDEAFSAWI VEQVVRHHEH YFSEFERVPD TPAEFADRMG IEGPDD
//
