ID Q9LH98_ARATH Unreviewed; 2081 AA.
AC Q9LH98;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 24-JAN-2024, entry version 130.
DE SubName: Full=Transmembrane protein, putative (DUF1216) {ECO:0000313|EMBL:AEE77489.1};
GN OrderedLocusNames=At3g28770 {ECO:0000313|Araport:AT3G28770,
GN ECO:0000313|EMBL:AEE77489.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB03174.1};
RN [1] {ECO:0000313|EMBL:BAB03174.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Nakamura Y.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2] {ECO:0000313|EMBL:AEE77489.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130713; DOI=10.1038/35048706;
RG European Union Chromosome 3 Arabidopsis Sequencing Consortium;
RG Institute for Genomic Research;
RG Kazusa DNA Research Institute;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M.,
RA Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N.,
RA Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L.,
RA Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N.,
RA Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P.,
RA Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S.,
RA Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S.,
RA Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3] {ECO:0000313|EMBL:AEE77489.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEE77489.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP002686; AEE77489.1; -; Genomic_DNA.
DR EMBL; AP002057; BAB03174.1; -; Genomic_DNA.
DR RefSeq; NP_189519.1; NM_113798.2.
DR AlphaFoldDB; Q9LH98; -.
DR STRING; 3702.Q9LH98; -.
DR PaxDb; 3702-AT3G28770-1; -.
DR ProteomicsDB; 174911; -.
DR EnsemblPlants; AT3G28770.1; AT3G28770.1; AT3G28770.
DR GeneID; 822509; -.
DR Gramene; AT3G28770.1; AT3G28770.1; AT3G28770.
DR Araport; AT3G28770; -.
DR TAIR; AT3G28770; -.
DR eggNOG; ENOG502RRI6; Eukaryota.
DR HOGENOM; CLU_232670_0_0_1; -.
DR OrthoDB; 695140at2759; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LH98; baseline and differential.
DR InterPro; IPR009605; DUF1216.
DR PANTHER; PTHR31607; DUF1216 DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR PANTHER; PTHR31607:SF28; DUF1216 DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR Pfam; PF06746; DUF1216; 2.
PE 1: Evidence at protein level;
KW Membrane {ECO:0000313|EMBL:AEE77489.1};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9LH98,
KW ECO:0007829|ProteomicsDB:Q9LH98};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000313|EMBL:AEE77489.1}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..2081
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5015099817"
FT DOMAIN 66..198
FT /note="DUF1216"
FT /evidence="ECO:0000259|Pfam:PF06746"
FT DOMAIN 1907..2057
FT /note="DUF1216"
FT /evidence="ECO:0000259|Pfam:PF06746"
FT REGION 185..1884
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2045..2081
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 185..227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..281
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..305
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 307..331
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 333..362
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..407
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 408..456
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..488
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 489..512
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 513..540
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 541..555
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 557..638
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 652..845
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 853..901
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 910..939
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 954..1260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1261..1291
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1316..1371
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1372..1402
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1427..1482
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1483..1537
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1580..1662
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1668..1733
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1741..1786
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1787..1806
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1816..1884
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2045..2067
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2081 AA; 232853 MW; D3603E1F85EFFF29 CRC64;
MRKVYLFFVC CIVATSLTLN VVLAHETVVN PPNTIKDIEP YISDRALGFV LKLENNCPIR
EQLRSFFEKL KDLLKLESSV TPLIEDNEPK TFKFDLKSKS ENLLQTMFML GRGLLSSSIR
KEMFEVMKSL TELHAAIGRV IIEKHIKGDE AMSLSLEQKN AVETSITQWE QTITRIVKIV
VEVKSKSSSE ASSEESSSTE HNNVTTGSNM VETNGENSES TQEKGDGVEG SNGGDVSMEN
LQGNKVEDLK EGNNVVENGE TKENNGENVE SNNEKEVEGQ GESIGDSAIE KNLESKEDVK
SEVEAAKNDG SSMTENLGEA QGNNGVSTID NEKEVEGQGE SIEDSDIEKN LESKEDVKSE
VEAAKNAGSS MTGKLEEAQR NNGVSTNETM NSENKGSGES TNDKMVNATT NDEDHKKENK
EETHENNGES VKGENLENKA GNEESMKGEN LENKVGNEEL KGNASVEAKT NNESSKEEKR
EESQRSNEVY MNKETTKGEN VNIQGESIGD STKDNSLENK EDVKPKVDAN ESDGNSTKER
HQEAQVNNGV STEDKNLDNI GADEQKKNDK SVEVTTNDGD HTKEKREETQ GNNGESVKNE
NLENKEDKKE LKDDESVGAK TNNETSLEEK REQTQKGHDN SINSKIVDNK GGNADSNKEK
EVHVGDSTND NNMESKEDTK SEVEVKKNDG SSEKGEEGKE NNKDSMEDKK LENKESQTDS
KDDKSVDDKQ EEAQIYGGES KDDKSVEAKG KKKESKENKK TKTNENRVRN KEENVQGNKK
ESEKVEKGEK KESKDAKSVE TKDNKKLSST ENRDEAKERS GEDNKEDKEE SKDYQSVEAK
EKNENGGVDT NVGNKEDSKD LKDDRSVEVK ANKEESMKKK REEVQRNDKS STKEVRDFAN
NMDIDVQKGS GESVKYKKDE KKEGNKEENK DTINTSSKQK GKDKKKKKKE SKNSNMKKKE
EDKKEYVNNE LKKQEDNKKE TTKSENSKLK EENKDNKEKK ESEDSASKNR EKKEYEEKKS
KTKEEAKKEK KKSQDKKREE KDSEERKSKK EKEESRDLKA KKKEEETKEK KESENHKSKK
KEDKKEHEDN KSMKKEEDKK EKKKHEESKS RKKEEDKKDM EKLEDQNSNK KKEDKNEKKK
SQHVKLVKKE SDKKEKKENE EKSETKEIES SKSQKNEVDK KEKKSSKDQQ KKKEKEMKES
EEKKLKKNEE DRKKQTSVEE NKKQKETKKE KNKPKDDKKN TTKQSGGKKE SMESESKEAE
NQQKSQATTQ ADSDESKNEI LMQADSQADS HSDSQADSDE SKNEILMQAD SQATTQRNNE
EDRKKQTSVA ENKKQKETKE EKNKPKDDKK NTTKQSGGKK ESMESESKEA ENQQKSQATT
QADSDESKNE ILMQADSQAD SHSDSQADSD ESKNEILMQA DSQATTQRNN EEDRKKQTSV
AENKKQKETK EEKNKPKDDK KNTTEQSGGK KESMESESKE AENQQKSQAT TQGESDESKN
EILMQADSQA DTHANSQGDS DESKNEILMQ ADSQADSQTD SDESKNEILM QADSQADSQT
DSDESKNEIL MQADSQAKIG ESLEDNKVKG KEDNGDEVGK ENSKTIEVKG RHEESKDGKT
NENGGKEVST EEGSKDSNIV ERNGGKEDSI KEGSEDGKTV EINGGEELST EEGSKDGKIE
EGKEGKENST KEGSKDDKIE EGMEGKENST KESSKDGKIN EIHGDKEATM EEGSKDGGTN
STGKDSKDSK SVEINGVKDD SLKDDSKNGD INEINNGKED SVKDNVTEIQ GNDNSLTNST
SSEPNGDKLD TNKDSMKNNT MEAQGGSNGD STNGETEETK ESNVSMNNQN MQDVGSNENS
MNNQTTGTGD DIISTTTDTE SNTSKEVTSF ISNLEEKSPG TQEFQSFFQK LKDYMKYLCP
VSSTFEAKDS RSYMSEMISM ATKLSDAMAV LQAKKSGSGQ MKTTLQGYQQ EVMKTLTILQ
SVMGKAVTEQ QSKDSGSLTL TLSQQQAIKE IVLKWEQVMS QFVKIATESE KQFSLEISTE
NGYHMKKSYN SSSSSSSSSS SSSRSDLKLN GEHLKGMGMN G
//
