ID Q9LI88_ARATH Unreviewed; 183 AA.
AC Q9LI88;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 27-MAR-2024, entry version 146.
DE SubName: Full=Ribosomal protein S21 family protein {ECO:0000313|EMBL:AEE77274.1};
GN Name=GHS1 {ECO:0000313|EMBL:AEE77274.1, ECO:0000313|TAIR:AT3G27160};
GN Synonyms=GLUCOSE HYPERSENSITIVE 1 {ECO:0000313|EMBL:AEE77274.1};
GN OrderedLocusNames=At3g27160 {ECO:0000313|Araport:AT3G27160,
GN ECO:0000313|EMBL:AEE77274.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB01933.1};
RN [1] {ECO:0000313|EMBL:BAB01933.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Nakamura Y.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2] {ECO:0000313|EMBL:AEE77274.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130713; DOI=10.1038/35048706;
RG European Union Chromosome 3 Arabidopsis Sequencing Consortium;
RG Institute for Genomic Research;
RG Kazusa DNA Research Institute;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M.,
RA Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N.,
RA Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L.,
RA Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N.,
RA Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P.,
RA Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S.,
RA Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S.,
RA Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3] {ECO:0000313|EMBL:AEE77274.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEE77274.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS21 family.
CC {ECO:0000256|ARBA:ARBA00006640}.
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DR EMBL; CP002686; AEE77274.1; -; Genomic_DNA.
DR EMBL; AP001312; BAB01933.1; -; Genomic_DNA.
DR RefSeq; NP_566809.1; NM_113630.3.
DR AlphaFoldDB; Q9LI88; -.
DR PaxDb; 3702-AT3G27160-1; -.
DR ProteomicsDB; 174923; -.
DR EnsemblPlants; AT3G27160.1; AT3G27160.1; AT3G27160.
DR GeneID; 822335; -.
DR Gramene; AT3G27160.1; AT3G27160.1; AT3G27160.
DR Araport; AT3G27160; -.
DR TAIR; AT3G27160; GHS1.
DR eggNOG; ENOG502RZIG; Eukaryota.
DR HOGENOM; CLU_096251_2_0_1; -.
DR OMA; DVMAVTC; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LI88; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0009534; C:chloroplast thylakoid; HDA:TAIR.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 1.20.5.1150; Ribosomal protein S8; 1.
DR HAMAP; MF_00358; Ribosomal_S21; 1.
DR InterPro; IPR001911; Ribosomal_bS21.
DR InterPro; IPR038380; Ribosomal_bS21_sf.
DR NCBIfam; TIGR00030; S21p; 1.
DR PANTHER; PTHR21109:SF0; 28S RIBOSOMAL PROTEIN S21, MITOCHONDRIAL; 1.
DR PANTHER; PTHR21109; MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; 1.
DR Pfam; PF01165; Ribosomal_S21; 1.
DR PRINTS; PR00976; RIBOSOMALS21.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9LI88,
KW ECO:0007829|ProteomicsDB:Q9LI88};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000313|EMBL:AEE77274.1}.
FT REGION 125..183
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 147..173
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 183 AA; 20911 MW; 277A29A84A2FE015 CRC64;
MAASFSLTSF ISFISPFKSQ TKPTPPPNLT LPSPTISQRR RNDLAIESMA VEETSSTASS
LSSELASVIC PSLAYSNTLF FSSGYNVQVF VEDNESEERL VNRFRREVMR TGVIQECKRR
RYFENKQDEK KRRTRDAAKR NKKRRPQARF TQETREEAAA ATKSKKKDEE EDNWEMPGGD
VPS
//
