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Database: UniProt
Entry: Q9LID6
LinkDB: Q9LID6
Original site: Q9LID6 
ID   AB1E_ARATH              Reviewed;         603 AA.
AC   Q9LID6;
DT   07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   13-FEB-2019, entry version 119.
DE   RecName: Full=ABC transporter E family member 1;
DE            Short=ABC transporter ABCE.1;
DE            Short=AtABCE1;
DE   AltName: Full=RNase L inhibitor-like protein 1;
DE            Short=AtRLI1;
DE            Short=AthaRLI1;
GN   Name=ABCE1; Synonyms=RLI1; OrderedLocusNames=At3g13640;
GN   ORFNames=MMM17.7;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA   Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. II.
RT   Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC
RT   and BAC clones.";
RL   DNA Res. 7:217-221(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana
RT   reference genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
RA   Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
RA   Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
RA   Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
RA   Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
RA   Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
RA   Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
RA   Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
RA   Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
RA   Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
RA   Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=11346655; DOI=10.1074/jbc.M103104200;
RA   Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A.;
RT   "The Arabidopsis thaliana ABC protein superfamily, a complete
RT   inventory.";
RL   J. Biol. Chem. 276:30231-30244(2001).
RN   [5]
RP   GENE FAMILY.
RX   PubMed=11855639; DOI=10.1007/s004250100661;
RA   Martinoia E., Klein M., Geisler M., Bovet L., Forestier C.,
RA   Kolukisaoglu H.U., Mueller-Roeber B., Schulz B.;
RT   "Multifunctionality of plant ABC transporters -- more than just
RT   detoxifiers.";
RL   Planta 214:345-355(2002).
RN   [6]
RP   TISSUE SPECIFICITY.
RX   PubMed=15383904; DOI=10.1007/s00239-004-2600-4;
RA   Braz A.S.K., Finnegan J., Waterhouse P., Margis R.;
RT   "A plant orthologue of RNase L inhibitor (RLI) is induced in plants
RT   showing RNA interference.";
RL   J. Mol. Evol. 59:20-30(2004).
RN   [7]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18299247; DOI=10.1016/j.tplants.2008.02.001;
RA   Verrier P.J., Bird D., Burla B., Dassa E., Forestier C., Geisler M.,
RA   Klein M., Kolukisaoglu H.U., Lee Y., Martinoia E., Murphy A.,
RA   Rea P.A., Samuels L., Schulz B., Spalding E.J., Yazaki K.,
RA   Theodoulou F.L.;
RT   "Plant ABC proteins - a unified nomenclature and updated inventory.";
RL   Trends Plant Sci. 13:151-159(2008).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and
CC       siliques. {ECO:0000269|PubMed:15383904}.
CC   -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCE
CC       family. {ECO:0000305}.
DR   EMBL; AP001307; BAB01911.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE75386.1; -; Genomic_DNA.
DR   EMBL; BT003947; AAO41992.1; -; mRNA.
DR   EMBL; BT005042; AAO50575.1; -; mRNA.
DR   RefSeq; NP_187973.1; NM_112210.3.
DR   UniGene; At.43389; -.
DR   ProteinModelPortal; Q9LID6; -.
DR   SMR; Q9LID6; -.
DR   BioGrid; 5902; 1.
DR   IntAct; Q9LID6; 1.
DR   STRING; 3702.AT3G13640.1; -.
DR   PaxDb; Q9LID6; -.
DR   PRIDE; Q9LID6; -.
DR   EnsemblPlants; AT3G13640.1; AT3G13640.1; AT3G13640.
DR   GeneID; 820568; -.
DR   Gramene; AT3G13640.1; AT3G13640.1; AT3G13640.
DR   KEGG; ath:AT3G13640; -.
DR   Araport; AT3G13640; -.
DR   TAIR; locus:2091506; AT3G13640.
DR   eggNOG; KOG0063; Eukaryota.
DR   eggNOG; COG1245; LUCA.
DR   HOGENOM; HOG000222803; -.
DR   InParanoid; Q9LID6; -.
DR   OMA; AVMDFSC; -.
DR   OrthoDB; 359213at2759; -.
DR   PhylomeDB; Q9LID6; -.
DR   PRO; PR:Q9LID6; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   Genevisible; Q9LID6; AT.
DR   GO; GO:0005623; C:cell; IEA:GOC.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IBA:GO_Central.
DR   GO; GO:0016887; F:ATPase activity; IEA:InterPro.
DR   GO; GO:0005506; F:iron ion binding; IBA:GO_Central.
DR   GO; GO:0043024; F:ribosomal small subunit binding; IBA:GO_Central.
DR   GO; GO:0005215; F:transporter activity; ISS:TAIR.
DR   GO; GO:0000054; P:ribosomal subunit export from nucleus; IBA:GO_Central.
DR   GO; GO:0006413; P:translational initiation; IBA:GO_Central.
DR   GO; GO:0006415; P:translational termination; IBA:GO_Central.
DR   CDD; cd03236; ABC_RNaseL_inhibitor_domain1; 1.
DR   InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR   InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003439; ABC_transporter-like.
DR   InterPro; IPR017871; ABC_transporter_CS.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR013283; RLI1.
DR   InterPro; IPR034348; RLI_dom_1.
DR   InterPro; IPR007209; RNaseL-inhib_metal-bd_dom.
DR   PANTHER; PTHR19248; PTHR19248; 1.
DR   Pfam; PF00005; ABC_tran; 2.
DR   Pfam; PF00037; Fer4; 1.
DR   Pfam; PF04068; RLI; 1.
DR   PRINTS; PR01868; ABCEFAMILY.
DR   SMART; SM00382; AAA; 2.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   PROSITE; PS00198; 4FE4S_FER_1; 1.
DR   PROSITE; PS51379; 4FE4S_FER_2; 2.
DR   PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR   PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
PE   2: Evidence at transcript level;
KW   4Fe-4S; ATP-binding; Complete proteome; Iron; Iron-sulfur; Membrane;
KW   Metal-binding; Nucleotide-binding; Reference proteome; Repeat;
KW   Transport.
FT   CHAIN         1    603       ABC transporter E family member 1.
FT                                /FTId=PRO_0000379137.
FT   DOMAIN        7     39       4Fe-4S ferredoxin-type 1.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00711}.
FT   DOMAIN       46     75       4Fe-4S ferredoxin-type 2.
FT                                {ECO:0000255|PROSITE-ProRule:PRU00711}.
FT   DOMAIN       70    315       ABC transporter 1. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00434}.
FT   DOMAIN      344    566       ABC transporter 2. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00434}.
FT   NP_BIND     110    117       ATP. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00434}.
FT   NP_BIND     381    388       ATP. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00434}.
SQ   SEQUENCE   603 AA;  68161 MW;  B5DE663E568BF543 CRC64;
     MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI
     CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP RPGQVLGLVG TNGIGKSTAL
     KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV
     RGNLGKMLEK LDERGLMEEI CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF
     DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
     LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG
     DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR EEGVQSEIPE FNVSYKPQGN
     DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL
     GKPADIYLID EPSAHLDSEQ RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE
     GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
     LDD
//
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