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Database: UniProt
Entry: Q9SGP3_ARATH
LinkDB: Q9SGP3_ARATH
Original site: Q9SGP3_ARATH 
ID   Q9SGP3_ARATH            Unreviewed;       185 AA.
AC   Q9SGP3;
DT   01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2000, sequence version 1.
DT   24-JAN-2024, entry version 163.
DE   SubName: Full=AGAMOUS-like 58 {ECO:0000313|EMBL:AEE30978.1};
DE   SubName: Full=F3M18.11 {ECO:0000313|EMBL:AAF16765.1};
GN   Name=AGL58 {ECO:0000313|EMBL:AEE30978.1, ECO:0000313|TAIR:AT1G28450};
GN   Synonyms=AGAMOUS-like 58 {ECO:0000313|EMBL:AEE30978.1};
GN   OrderedLocusNames=At1g28450 {ECO:0000313|EMBL:AEE30978.1};
GN   ORFNames=F3M18.11 {ECO:0000313|EMBL:AEE30978.1}, F3M18_11
GN   {ECO:0000313|EMBL:AEE30978.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AAF16765.1};
RN   [1] {ECO:0000313|EMBL:AAF16765.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Khan S.,
RA   Kim C., Altafi H., Bei Q., Chin C., Chiou J., Choi E., Conn L., Conway A.,
RA   Gonzales A., Hansen N., Howing B., Koo T., Lam B., Lee J., Lenz C., Li J.,
RA   Liu A., Liu K., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P.,
RA   Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M.,
RA   Yu G., Federspiel N.A., Theologis A., Ecker J.R.;
RT   "Genomic sequence for Arabidopsis thaliana BAC F3M18 from chromosome I.";
RL   Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AAF16765.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Khan S.,
RA   Kim C., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L., Conway A.,
RA   Gonzalez A., Hansen N., Howing B., Koo T., Lam B., Lee J., Lenz C., Li J.,
RA   Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P.,
RA   Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M.,
RA   Yu G., Davis R., Federspiel N., Theologis A., Ecker J.;
RL   Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AEE30978.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [4] {ECO:0000313|EMBL:AEE30978.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AEE30978.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA   Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; AC010155; AAF16765.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE30978.1; -; Genomic_DNA.
DR   RefSeq; NP_174167.1; NM_102613.2.
DR   STRING; 3702.Q9SGP3; -.
DR   PaxDb; 3702-AT1G28450-1; -.
DR   EnsemblPlants; AT1G28450.1; AT1G28450.1; AT1G28450.
DR   GeneID; 839743; -.
DR   Gramene; AT1G28450.1; AT1G28450.1; AT1G28450.
DR   KEGG; ath:AT1G28450; -.
DR   TAIR; AT1G28450; AGL58.
DR   eggNOG; KOG0014; Eukaryota.
DR   HOGENOM; CLU_053053_5_1_1; -.
DR   OMA; IENADDW; -.
DR   OrthoDB; 686087at2759; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd00265; MADS_MEF2_like; 1.
DR   Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR   InterPro; IPR033896; MADS_MEF2-like.
DR   InterPro; IPR002100; TF_MADSbox.
DR   InterPro; IPR036879; TF_MADSbox_sf.
DR   PANTHER; PTHR11945:SF725; AGAMOUS-LIKE 58-RELATED; 1.
DR   PANTHER; PTHR11945; MADS BOX PROTEIN; 1.
DR   Pfam; PF00319; SRF-TF; 1.
DR   PRINTS; PR00404; MADSDOMAIN.
DR   SMART; SM00432; MADS; 1.
DR   SUPFAM; SSF55455; SRF-like; 1.
DR   PROSITE; PS50066; MADS_BOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        33..54
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          7..67
FT                   /note="MADS-box"
FT                   /evidence="ECO:0000259|PROSITE:PS50066"
FT   COILED          150..177
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   185 AA;  21145 MW;  8A6EDB4A105BFF8B CRC64;
     MNPKKTKGKQ KINIKKIEKD EDRSVTLSKR LNAIYTMIIE LSILCGVEVA FIGYSCSGKP
     YTFGSPSFQA VVERFLNGEA SSSSSSSLQR SVKNAHKQAK IQELCKRYNR LVEELKVDEV
     KVKKAAALAE TRAVNKDAWW KADPNDVKDH EKAKKMMEKY QELKEKLREE VALRIKRGHD
     ENNNK
//
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