ID RS3_PYRAB Reviewed; 210 AA.
AC Q9V1U1; G8ZHX0;
DT 02-NOV-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 27-MAR-2024, entry version 126.
DE RecName: Full=Small ribosomal subunit protein uS3 {ECO:0000255|HAMAP-Rule:MF_01309};
DE AltName: Full=30S ribosomal protein S3 {ECO:0000305};
GN Name=rps3 {ECO:0000255|HAMAP-Rule:MF_01309}; OrderedLocusNames=PYRAB03360;
GN ORFNames=PAB2125;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: Binds the lower part of the 30S subunit head.
CC {ECO:0000255|HAMAP-Rule:MF_01309}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01309}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS3 family.
CC {ECO:0000255|HAMAP-Rule:MF_01309}.
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DR EMBL; AJ248284; CAB49258.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69713.1; -; Genomic_DNA.
DR PIR; C75147; C75147.
DR RefSeq; WP_010867458.1; NC_000868.1.
DR PDB; 6SW9; EM; 4.20 A; Z=1-210.
DR PDB; 6SWC; EM; 3.30 A; Z=1-210.
DR PDB; 6SWE; EM; 3.10 A; Z=1-210.
DR PDB; 7ZAG; EM; 2.77 A; Z=1-210.
DR PDB; 7ZAH; EM; 2.70 A; Z=1-210.
DR PDB; 7ZAI; EM; 2.60 A; Z=1-210.
DR PDB; 7ZHG; EM; 2.25 A; Z=1-210.
DR PDBsum; 6SW9; -.
DR PDBsum; 6SWC; -.
DR PDBsum; 6SWE; -.
DR PDBsum; 7ZAG; -.
DR PDBsum; 7ZAH; -.
DR PDBsum; 7ZAI; -.
DR PDBsum; 7ZHG; -.
DR AlphaFoldDB; Q9V1U1; -.
DR EMDB; EMD-10320; -.
DR EMDB; EMD-10322; -.
DR EMDB; EMD-10324; -.
DR EMDB; EMD-14579; -.
DR EMDB; EMD-14580; -.
DR EMDB; EMD-14581; -.
DR EMDB; EMD-14731; -.
DR SMR; Q9V1U1; -.
DR STRING; 272844.PAB2125; -.
DR GeneID; 1495226; -.
DR KEGG; pab:PAB2125; -.
DR PATRIC; fig|272844.11.peg.357; -.
DR eggNOG; arCOG04097; Archaea.
DR HOGENOM; CLU_058591_1_1_2; -.
DR OrthoDB; 9126at2157; -.
DR PhylomeDB; Q9V1U1; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd02411; KH-II_30S_S3_arch; 1.
DR Gene3D; 3.30.300.20; -; 1.
DR Gene3D; 3.30.1140.32; Ribosomal protein S3, C-terminal domain; 1.
DR HAMAP; MF_01309_A; Ribosomal_uS3_A; 1.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR004044; KH_dom_type_2.
DR InterPro; IPR009019; KH_sf_prok-type.
DR InterPro; IPR036419; Ribosomal_S3_C_sf.
DR InterPro; IPR027488; Ribosomal_uS3_arc.
DR InterPro; IPR001351; Ribosomal_uS3_C.
DR InterPro; IPR005703; Ribosomal_uS3_euk/arc.
DR NCBIfam; TIGR01008; uS3_euk_arch; 1.
DR PANTHER; PTHR11760; 30S/40S RIBOSOMAL PROTEIN S3; 1.
DR PANTHER; PTHR11760:SF32; 40S RIBOSOMAL PROTEIN S3; 1.
DR Pfam; PF07650; KH_2; 1.
DR Pfam; PF00189; Ribosomal_S3_C; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54814; Prokaryotic type KH domain (KH-domain type II); 1.
DR SUPFAM; SSF54821; Ribosomal protein S3 C-terminal domain; 1.
DR PROSITE; PS50823; KH_TYPE_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..210
FT /note="Small ribosomal subunit protein uS3"
FT /id="PRO_0000130256"
FT DOMAIN 17..86
FT /note="KH type-2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01309"
FT HELIX 3..24
FT /evidence="ECO:0007829|PDB:7ZHG"
FT TURN 25..29
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 33..38
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 41..49
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 51..55
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 57..61
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 62..71
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 76..84
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 88..90
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 92..105
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 109..122
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 126..134
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 137..140
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 142..149
FT /evidence="ECO:0007829|PDB:7ZHG"
FT HELIX 156..161
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 163..171
FT /evidence="ECO:0007829|PDB:7ZHG"
FT STRAND 174..183
FT /evidence="ECO:0007829|PDB:7ZHG"
SQ SEQUENCE 210 AA; 23437 MW; 6832D43E2E0D31CB CRC64;
MAIERYFIRE AVKEMLIDEF LEKELRRAGY GGLDIKKTPL GTKVIIFAAN PGYVIGRGGR
RIRELTRILE RQFGLENPQI DVQEIKNPYL NAKVQAVRIA QALERGIHFR RAAYAAMRAI
MSNGARGVEI RISGKLTGER AKSVRFYQGY LAKVGNPAET LVSKGYAQAL LKLGVIGVKV
AIMPPDARLP DEIEIIEKPV EEEVSSNEAE
//
