ID R0F2B2_9BRAS Unreviewed; 832 AA.
AC R0F2B2;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN ORFNames=CARUB_v10004088mg {ECO:0000313|EMBL:EOA15446.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA15446.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870811; EOA15446.1; -; Genomic_DNA.
DR RefSeq; XP_006282548.1; XM_006282486.1.
DR AlphaFoldDB; R0F2B2; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR004332; Transposase_MuDR.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31973:SF149; OS06G0632700 PROTEIN; 1.
DR PANTHER; PTHR31973; POLYPROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF03108; DBD_Tnp_Mut; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 711..743
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 184..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 189..221
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 832 AA; 93392 MW; 4C2C8282DAB95FFB CRC64;
MMHQFCNILG ITFVRSYDIA VETEMTPVAY GNVANVPIQV VAGTPEENNL TDVNFRSRKV
SPRITSESSG LVDIPVTLST DPVVPAKSTS KNFKKKGKKS LVSNISKLTP KSLKQSFIGS
NPGTKSSPPM SLNVVCGVTT GSPISVSKRR RVMEEPSILV QDENVMDTRR RSLRNRGEIR
KPVIETDDDE FVYSDEGDDA DDVDDNDVDD NDADDDDVDD DKDYVQDIET YYPETEDLDP
ERETNYSIAN ANDGSVESLV ASWKRCITGV GQGFESVVEF RDALQKYAVA CRFGYRLRKN
ESNRACGVCL VGGCPWKIYA SWVPSESVFR IKKFNRRHTC AGESWKSAHP KKNWVVSIIK
ERLQENPNQK TKNIADSIFQ DFGIELSYCT IRRGIDEAKG GLHTSFKEAY KHLPLFVNKL
VEANTGSMVD LVVGEDRRFQ RLFLSFQSCT HGFQTGCRPL LFLDAIPFKS RYHEILLIAS
ALDGDDGVLP VALALVDVET DETWRWFLEQ LKIAVPSLRA LTFVSDREKG LESSVLEIFE
NAQHGYSIHY LMEDFMRSLR GPFLGDGKPS LSYYLLAAAR ADRVDGFKVY TEQIKRVSPR
AYDWVMQIES KHWAGALFEG EPYSHITSDV GEIYSKWIDE IQETSIVQKL VVFVNKIVEL
VNGSQEKSKQ WFSQLVPTKE ESLVEECKKA STLKVFFCSD TLFEVHDGSV QLVDISNQTC
SCYGWKPTGL PCQHAIAVLN TKGRNLYDYC SSFFTVESYR LTYSQALGAV AIDLALVEAE
GSSKEEEEEV LPPLFSRVQG GEKRIKDRKR GRSVCCTKCG GVGHNKATCK DD
//
