ID R0FB43_9BRAS Unreviewed; 795 AA.
AC R0FB43;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
DE Flags: Fragment;
GN ORFNames=CARUB_v10000255mg {ECO:0000313|EMBL:EOA19262.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA19262.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR EMBL; KB870810; EOA19262.1; -; Genomic_DNA.
DR RefSeq; XP_006286364.1; XM_006286302.1.
DR AlphaFoldDB; R0FB43; -.
DR GeneID; 17882367; -.
DR eggNOG; ENOG502QVUN; Eukaryota.
DR OrthoDB; 892962at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR PANTHER; PTHR31669:SF149; PROTEIN FAR1-RELATED SEQUENCE 12-RELATED; 1.
DR Pfam; PF03101; FAR1; 2.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 681..717
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 135..216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..186
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOA19262.1"
SQ SEQUENCE 795 AA; 91533 MW; 81C996CE62B86570 CRC64;
DELFCVFFNC SADTELNSFN NMVAKAYPVR VLHHNNNGIS EDEEGGSGVE PYVGLEFDTA
EEAREYYNAY AIRTGFKVRT GQLYRSRTDG TVSSRRFVCS KEGFQLNSRT GCTAFIRVQR
RDTGKWVLDQ IQKEHNHELG GEGQVEETTP RPSRAPAPTK LGVTVNPHRP KMKVVDESER
GTRSCPGGFK RFKGGGEGEV SDDHHQTQQP KAVNGTEPYA GLEFGSANEA CQFYQAYAEV
VGFRVRIGQL FRSKVDGSIT SRRFVCSREG FQHPSRMGCG AYMRIKRQDS GGWIVDRLNK
DHNHDLEPGK KNDAGMKKIT DDGTGGLDSV DLIELNDFGN NHIKKTRENR IGKEWYPLLL
DYFQSRQTED MGFFYAVELD VNNGSCMSIF WADSRARFAC SQFGDTVVFD TSYRKGNYAV
PFATIIGFNH HRQPVLLGCA MVADESKEAF LWLFQTWLRA MSGRRPRSIV ADQDLPIQQA
LVQVFPGAHH RYSAWQIREK EQENLRPFPS EFKYEYEKCI YQTQTTVEFD SVWNALINKY
GLRDDIWLRE IYEQRENWVP AYLRASFFAG IPINGTIEPF FGASLDALTP LREFISRYEQ
ALEQRREEER KEDFNSYNLQ PFLQTKEPVE EQCRRLYTLT VFRIFQNELV QSYNYLCLKT
YEEGAISRFL VRKCGNESEK HAVTFSASNL NSSCSCQMFE HEGLLCRHIL KVFNLLDIRE
LPSRYILHRW TKNAEFGFVR DMESGVSAQD LKALMVWSLR EAASKYIEFG TSSLEKYKLA
YEIMREGGKK LCWQR
//
