ID R0FL02_9BRAS Unreviewed; 664 AA.
AC R0FL02;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE RecName: Full=SET domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10003306mg {ECO:0000313|EMBL:EOA22636.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA22636.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
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DR EMBL; KB870810; EOA22636.1; -; Genomic_DNA.
DR RefSeq; XP_006289738.1; XM_006289676.1.
DR AlphaFoldDB; R0FL02; -.
DR STRING; 81985.R0FL02; -.
DR GeneID; 17881599; -.
DR KEGG; crb:17881599; -.
DR eggNOG; KOG1082; Eukaryota.
DR OrthoDB; 5481936at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0042054; F:histone methyltransferase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd10545; SET_AtSUVH-like; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 2.30.280.10; SRA-YDG; 1.
DR InterPro; IPR025794; H3-K9-MeTrfase_plant.
DR InterPro; IPR003616; Post-SET_dom.
DR InterPro; IPR007728; Pre-SET_dom.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR PANTHER; PTHR45660:SF73; HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1; 1.
DR Pfam; PF05033; Pre-SET; 1.
DR Pfam; PF02182; SAD_SRA; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00468; PreSET; 1.
DR SMART; SM00317; SET; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50868; POST_SET; 1.
DR PROSITE; PS50867; PRE_SET; 1.
DR PROSITE; PS51575; SAM_MT43_SUVAR39_2; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS51015; YDG; 1.
PE 4: Predicted;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00358}; Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 205..351
FT /note="YDG"
FT /evidence="ECO:0000259|PROSITE:PS51015"
FT DOMAIN 426..486
FT /note="Pre-SET"
FT /evidence="ECO:0000259|PROSITE:PS50867"
FT DOMAIN 489..633
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 648..664
FT /note="Post-SET"
FT /evidence="ECO:0000259|PROSITE:PS50868"
FT REGION 54..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 101..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..117
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 664 AA; 73680 MW; 6D71F5D5153373D8 CRC64;
MDGNAGNYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFTSSQT
NQHTPDLNQA QYPPQHHQPQ NPHVYQHPPN ASVPSMVTPL RSFRSPDTSN GNSELEGSTV
KRKIPKKRPI ANPNFESGIS VSDRENGNRE LVVSVLMRFD ALRRRFSQLE DAKEAVSGII
KRGDLKSGST CMSRGVRTNT KKRPGIVPGV EIGDIFFFRF EMCLVGLHSP SMAGIDYLVV
KGETEEEPIA TSIVSSGYYD NDEGNPDVLI YTGQGGNADK DKQSSDQKLE RGNLALEKSL
RRNSPVRVIR GLKETSHNAK IYIYDGLYEI KESWVEKGKS GHNTFKYKLV RAPGQPPAFA
TWTAIQKWKG GVPSRQGLIL PDITSGVESI PVSLMNEVDT DNGPGYFTYS KTVNYSESFK
LTQPSFGCDC GNSCKPGNLD CHCIRKNGGD FPYTGNGVLI SRKPMIYECS PSCPCPTCKN
KVTQMGIKVR LEIFKTENRG WGLRSWDAIR AGSFICIYAG EAKDKSKVQQ TMADDDYTFD
TTRVYNPFKW NYEPGLADED ASEEMSEESE IPLPMIISAK NVGNVSRFMN HSCSPNVFWQ
PVTYENNSQL FVHVAFFAIS HIPPLTELTY DYGVSRPSGT QNGNPLYGKK KCFCGSAYCR
GSFG
//
