ID R0FL20_9BRAS Unreviewed; 977 AA.
AC R0FL20;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10016640mg {ECO:0000313|EMBL:EOA23157.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA23157.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; KB870809; EOA23157.1; -; Genomic_DNA.
DR RefSeq; XP_006290259.1; XM_006290197.1.
DR AlphaFoldDB; R0FL20; -.
DR STRING; 81985.R0FL20; -.
DR GeneID; 17886674; -.
DR KEGG; crb:17886674; -.
DR eggNOG; KOG1051; Eukaryota.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 140..282
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 557..592
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT COILED 546..573
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 977 AA; 109112 MW; 3F4A09C876DAE7DC CRC64;
MRERERDKKL FVSSSSLSYL FPQTGRPFKT SLSLSPTSLS KRRRRLQLRI MGRLVAQFAV
PFLGSGRHVQ SKEYRKPRGC VKMMYSCQAP VLKLHSFAGL RATNPLDIMG RPRQDWFSMS
KLSIPKRKDK GKRCVTKAMF ERFTEKAIKV IMLAQEEARR LGHNFVGTEQ ILLGLIGEGT
GIAAKVLKSM GINLKDSRVE VEKIIGRGSG FVAVEIPFTP RAKRVLELSL EEARQLGHNY
IGSEHLLLGL LREGEGVAAR VLENLGADPS NIRTQVIRMV GENNEVTASV GGGSSSNSKM
PTLEEYGTNL TKLAEEGKLD PVVGRQPQIE RVVQILARRT KNNPCLIGEP GVGKTAIAEG
LAQRIASGDV PETIEGKTVI TLDMGLLVAG TKYRGEFEER LKKLMEEIRQ SDDIILFIDE
VHTLIGAGAA EGAIDAANIL KPALARGELQ CIGATTLDEY RKHIEKDPAL ERRFQPVKVP
EPTVDEAIQI LHGLRERYEI HHKLRYTDEA LVAAAQLSHQ YISDRFLPDK AIDLIDEAGS
RVRLRHAQVP EEARELEKQL RQITKEKNEA VRGQDFEKAG SHRDREIELR AEIAAVLAKG
KEVSKAENEA EEGGPTVTES DIQHIVATWT GIPVEKVSSD ESSRLLQMEQ TLHTRVIGQD
EAVKAISRAI RRARVGLKNP NRPIASFIFS GPTGVGKSEL AKALAAYYFG SEEAMIRLDM
SEFMERHTVS KLIGSPPGYV GYTEGGQLTE AVRRRPYTLV LFDEIEKAHP DVFNMMLQIL
EDGRLTDSKG RTVDFKNTLL IMTSNVGSSV IEKGGRRIGF DLDHDEKDSS YNRIKSLVTE
ELKQYFRPEF LNRLDEMIVF RQLTKLEVKE IADIMLKEVI TRLEVKEIEL QVTERFKERV
VDEGFDPSYG ARPLRRAIMR LLEDSMAEKM LSRDIKEGDS VIVDVDAEGS VVVLNGTNGR
AGGYVAEEAM EDPIPIL
//