ID R0FP64_9BRAS Unreviewed; 495 AA.
AC R0FP64;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10017083mg {ECO:0000313|EMBL:EOA23866.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA23866.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KB870809; EOA23866.1; -; Genomic_DNA.
DR RefSeq; XP_006290968.1; XM_006290906.1.
DR AlphaFoldDB; R0FP64; -.
DR STRING; 81985.R0FP64; -.
DR GeneID; 17886706; -.
DR KEGG; crb:17886706; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 1216305at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47874; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR47874:SF6; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 139..173
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 210..244
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 245..279
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 281..315
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 316..350
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 351..385
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 421..455
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 495 AA; 55784 MW; B17A64F4C238DF0D CRC64;
MELIQNPIQG INSAYAIENI KLCFSRQHIP STVCSRRVAS VSTTPTTCST KIPNDGTGKM
GSGLISTRHR VDPKKELSRI LRAESAVKGI ERKANSEKYL TLWPKAVLEA LDEAIKENRW
QSALKIFNLL RKQHWYEPRC KTYTKLFKVL GNCKQPDQAS LLFEVMLSEG LKPTIDVYTS
LIAVYGKSGL LDKAFSTLEY MKSASDCKPD VFTFTVLISC CCKLGRFDLV KSIVLEMSYL
GVGCSTVTYN TIIDGYGKAG MFEEMENVLA DMIEDGDSLP DVFTLNSIIG SYGNGGDTKK
MESWYNRFQL MGVQPDITTF NILILSFGKA GMYKKMCSVM EFMEKRFFSL TTVTYNIVIE
TFGKAGRIEK MDDIFRKMKY QGVKPNSITY CSLVNAYSKV GLLVKIDSIL RQIVNSDVIL
DTPFFNCIIN SYGQAGDLAT MKELYIQMEE RKCKPDKVTF ATMIKTYTAH GIFDAVHELE
KQMISTDIGK KRLME
//
