ID R0FWU3_9BRAS Unreviewed; 294 AA.
AC R0FWU3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=GAGA-binding transcriptional activator {ECO:0000256|RuleBase:RU367160};
GN ORFNames=CARUB_v10023579mg {ECO:0000313|EMBL:EOA27442.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA27442.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- FUNCTION: Transcriptional regulator that specifically binds to GA-rich
CC elements (GAGA-repeats) present in regulatory sequences of genes
CC involved in developmental processes. {ECO:0000256|RuleBase:RU367160}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367160}.
CC -!- SIMILARITY: Belongs to the BBR/BPC family.
CC {ECO:0000256|ARBA:ARBA00007911, ECO:0000256|RuleBase:RU367160}.
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DR EMBL; KB870808; EOA27442.1; -; Genomic_DNA.
DR RefSeq; XP_006294544.1; XM_006294482.1.
DR AlphaFoldDB; R0FWU3; -.
DR STRING; 81985.R0FWU3; -.
DR GeneID; 17887744; -.
DR KEGG; crb:17887744; -.
DR OrthoDB; 991826at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR InterPro; IPR010409; GAGA-bd_tscrpt_act.
DR PANTHER; PTHR31421; -; 1.
DR PANTHER; PTHR31421:SF3; PROTEIN BASIC PENTACYSTEINE4; 1.
DR Pfam; PF06217; GAGA_bind; 1.
DR SMART; SM01226; GAGA_bind; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|RuleBase:RU367160};
KW Nucleus {ECO:0000256|RuleBase:RU367160};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Transcription {ECO:0000256|RuleBase:RU367160};
KW Transcription regulation {ECO:0000256|RuleBase:RU367160}.
FT COILED 66..93
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 294 AA; 33062 MW; B5E657EC6A1E1F48 CRC64;
MENGGQYDNG RFKPDYLKGA QSMWNMMPQH QIKEQHNALV MNKKIMSILA ERDAAVHERN
QAVSAKKEAV AARDEALQQR DKALSERDKA LIERDNAYAA LQHHENSLNF ALSGGKRADG
DDCFGTETHK LAVFPLSTIP PEVTNTKVNK RKKENKQGQV KLKKVGEDLN RRVAAPGKKS
RTDWDSQDVG LNLVTFDETT MPVPMCTCTG SARQCYKWGN GGWQSSCCTT TLSQYPLPQM
PNKRHSRMGG RKMSGNVFSR LLSRLAAEGY DLSCPVDLKD YWARHGTNRY ITIK
//
