ID R0G492_9BRAS Unreviewed; 587 AA.
AC R0G492;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=CARUB_v10013303mg {ECO:0000313|EMBL:EOA30186.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA30186.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870807; EOA30186.1; -; Genomic_DNA.
DR RefSeq; XP_006297288.1; XM_006297226.1.
DR AlphaFoldDB; R0G492; -.
DR STRING; 81985.R0G492; -.
DR GeneID; 17892803; -.
DR KEGG; crb:17892803; -.
DR eggNOG; KOG2186; Eukaryota.
DR OrthoDB; 680501at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.1490.490; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 3.
DR InterPro; IPR039999; LYAR.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR014898; Znf_C2H2_LYAR.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR13100:SF10; CELL GROWTH-REGULATING NUCLEOLAR PROTEIN; 1.
DR PANTHER; PTHR13100; CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF08790; zf-LYAR; 1.
DR Pfam; PF12874; zf-met; 3.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SMART; SM00451; ZnF_U1; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 5.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS51804; ZF_C2HC_LYAR; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU01145}.
FT DOMAIN 389..466
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 288..340
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 587 AA; 66886 MW; 8C70ECCB6FE466B8 CRC64;
MVWFQCEDCG ESLKKPKLPR HFSMCSATKL SCIDCGNMFG QDSVHYHNQC ITEAEKYGPK
GLYNGENSKQ NQHDFYMNAE LYNNPSWFCS LCDANMTCEQ DYFAHVHGTK HLDKEREVAE
QPTIDKNNLK QQPDLDIYVG LSNHYPWFCS LCNINATSQH TLLSHANGKK HRANVKQFDA
EKQQRESEQQ TEVDINVGLS NCYPWFCSLC NAKATSQQTL LSHANGKKHR VNVEWFLAEQ
EQQLETPTVD KKDTNENASD GDFELKKVYL PVSSGVADGY SQADKKRKLE TFDETQNRDV
IQAKEAKGGR EEKSESNRAK KQDSERKGNK DKKQTKSDSD FEYDKEDIKQ LLVSYSKEEL
VNLVYKTAEK GSRLFSAIIE SADRDIARRN MFVRGFGWDT THENLKAAFE SYGEIEDCSV
VMDKDTGRAK GYGFVLFKTR KGAREALRNP EKRLYNRTVV CNLASKKPSG AGKVQDIVEA
VKIDLTQSEA AFPGLELSHQ HVLEDKHQQQ TMDMYRQNIP YYGHPQLPVF DPMYGALHGN
QMVAGPPNYC MFGSGMMMNQ GSMLPPPDHM GMAEQYVGDG QHAWYQR
//
