ID R0GA43_9BRAS Unreviewed; 506 AA.
AC R0GA43;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10015710mg {ECO:0000313|EMBL:EOA32436.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA32436.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KB870807; EOA32436.1; -; Genomic_DNA.
DR RefSeq; XP_006299538.1; XM_006299476.1.
DR AlphaFoldDB; R0GA43; -.
DR STRING; 81985.R0GA43; -.
DR GeneID; 17893644; -.
DR KEGG; crb:17893644; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 459284at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47934:SF6; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED; 1.
DR PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 203..237
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 283..317
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 318..352
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 388..422
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 423..457
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 506 AA; 57911 MW; 3C960EF5DC3CCA6B CRC64;
MLLKQLSPPF PLRRRISTLS SSTSTLNLPK LEPSPDAELI SQMLITNHNP FHFMESSLQL
NGISLSPNLI HQTLLRLRHN SKIALSFFQY LRSLPSPSPP SPTSFNLIID ILGRVRQFDV
VRQLIVEMDQ TSPETFLILV KRLIAAGLTR QAIRAFDDAP CFLENRRFGV VEFGFLLDTL
CKYGHTKMAV GVFNERKEEF GVDEKVYTIL IAGWCKLRRI DMAEKFLAEM IESGIEPNVV
TYNVLLNGIC RTASLHPEER FERNVRDAEK VFDEMRQRGI EPDVTSFSIV LHMYSRAHKS
ELTLDKLKLM KAKGISPTIE TYTSVVKCLC SCGRLEEAEE LLETMVGTGI SPSSATYNCF
FKEYKGRKDA NGAMNLYRKM KNGLCKPSTQ TYNVLLGTFI NLGKMETVKE IWDDLKGSET
GPDLDSYTSL IHGLCSKEKW KEACGYFVEM IEKGYLPQKL TFETLYKGLI QSNKLRTWRM
LKKKLDEESI TFGSEFQRYP FEPYKR
//