GenomeNet

Database: UniProt
Entry: R0GDV6_9BRAS
LinkDB: R0GDV6_9BRAS
Original site: R0GDV6_9BRAS 
ID   R0GDV6_9BRAS            Unreviewed;       736 AA.
AC   R0GDV6;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   RecName: Full=AMP-dependent synthetase/ligase domain-containing protein {ECO:0000259|Pfam:PF00501};
GN   ORFNames=CARUB_v10021452mg {ECO:0000313|EMBL:EOA33957.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA33957.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA   Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA   Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA   Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA   Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid mating
RT   system evolution.";
RL   Nat. Genet. 45:831-835(2013).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-
CC         CoA + AMP + diphosphate; Xref=Rhea:RHEA:15421, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:33019, ChEBI:CHEBI:57287, ChEBI:CHEBI:57560,
CC         ChEBI:CHEBI:83139, ChEBI:CHEBI:456215; EC=6.2.1.3;
CC         Evidence={ECO:0000256|ARBA:ARBA00036813};
CC   -!- PATHWAY: Lipid metabolism; fatty acid metabolism.
CC       {ECO:0000256|ARBA:ARBA00004872}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KB870806; EOA33957.1; -; Genomic_DNA.
DR   RefSeq; XP_006301059.1; XM_006300997.1.
DR   AlphaFoldDB; R0GDV6; -.
DR   STRING; 81985.R0GDV6; -.
DR   eggNOG; KOG1180; Eukaryota.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR   InterPro; IPR020845; AMP-binding_CS.
DR   InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR   InterPro; IPR042099; ANL_N_sf.
DR   PANTHER; PTHR43272:SF83; ACYL-COA SYNTHETASE LONG-CHAIN, ISOFORM J; 1.
DR   PANTHER; PTHR43272; LONG-CHAIN-FATTY-ACID--COA LIGASE; 1.
DR   Pfam; PF00501; AMP-binding; 2.
DR   SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 2.
DR   PROSITE; PS00455; AMP_BINDING; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT   DOMAIN          100..148
FT                   /note="AMP-dependent synthetase/ligase"
FT                   /evidence="ECO:0000259|Pfam:PF00501"
FT   DOMAIN          176..541
FT                   /note="AMP-dependent synthetase/ligase"
FT                   /evidence="ECO:0000259|Pfam:PF00501"
SQ   SEQUENCE   736 AA;  81200 MW;  4D340323D81275F1 CRC64;
     MIPYAAGVIV PLALTLLVQK SKKEKKRGVV VDVGGEPGYS IRNHRFTDPV SSHWEDISTL
     PELFELSCKA HSDRSFLGTR KLISKEIETS EDGKTFEKLH LGDYEWLTFA KTLEAVCNFA
     SGLVQIGHKT EERVAIFADT REEWFISLQV IPILYNRCLK FECTVSTVVT FLCDSMFQGC
     FRRNVTVVTI YSSLGEEALC HSLNETEVTT VICGNKELKK LMDIGHQLET VKRVICMDDE
     FPSDVNSNWM ATSFADVQKL GRENPVDPNF PLSADVAVIM YTSGSTGLPK GVMMTHGNVL
     ATVSAVMTIV PDLGKRDTYM AYLPLAHILE LAAESVMATI GSAIGYGSPL TLTDTSNKIK
     KGTKGDVTAL KPTIMTAVPA ILDRVRDGVR KKVDAKGGFS KKLFDFAYAR RLSAINGSWF
     GAWGLEKLLW DLLVFSKIRA VLGGQIRYLL SGGAPLSGDT QRFINICVGA PIGQGYGLTE
     TCAGGTFSEF DDTSVGRVGA PLPCSFVKLV DWPEGGYLTN DKPMPRGEIV IGGSNITLGY
     FKNEDKTEEV YKVGKSTLLV LAMLENRLVD EKGMRWFYTG DIGRFHPDGC LEIIDRKKDI
     VKLQHGEYVS LGKVEAALSI SPYVENIMVH ADSFYSYCVA LVVASQHTLE GWASKQGIDF
     ANFEELCTKE QAVKEVYASL VKSAKQSRLE KFEIPAKIKL LASPWTPESG LVTAALKLKR
     DVIRREFSED LTKLYA
//
DBGET integrated database retrieval system