ID R0GG31_9BRAS Unreviewed; 619 AA.
AC R0GG31;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=CARUB_v10022184mg {ECO:0000313|EMBL:EOA34621.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA34621.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; KB870806; EOA34621.1; -; Genomic_DNA.
DR RefSeq; XP_006301723.1; XM_006301661.1.
DR AlphaFoldDB; R0GG31; -.
DR STRING; 81985.R0GG31; -.
DR GeneID; 17894999; -.
DR KEGG; crb:17894999; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 459297at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47928:SF57; OS07G0191500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 94..129
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 166..196
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 197..227
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 300..334
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 525..619
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 619 AA; 69609 MW; 3519D6DBFFD92989 CRC64;
MSNSVLLHPL SPHVPPASSP SASVSGNHHQ RILSLSEKCS DMSQLKQLHA FTLRTTYPDE
PATLFLYGRI LQLSSSFSEV NYAFRVFDSI QNRSSFMWNT LIRACAHDVS RKEEAFLLYG
KMLERGESVP DKHTFPFVLK ACAYIFGLSE GKQVHCQVLK HGFSGDVYVN NGLIHLYGSC
GCLDLARKVF DEMPERSLVS WNSMIDALVR VGEFDSALQL FRKMQKSFEP DGYTMQSILS
ACAGLGSLSL GTWAHAFLLR KCDVDVAMDV LIKNSLIEMY YKCGSLKMAE QVFQGMQKRD
LASWNAMILG FAIHGRAEEA MDCFDRMVKK GENIKPNSVT FVALLIACNH RGMVNEGRQY
FDMMIRDYGI EPVLEHYGCI IDLVARAGYI SEAIDMVMSM PMKPDAVIWR SLLDACCKKG
ASVELSEEIA RHIIETREDS QSSNSSYSGA YVLLSRVYAS ASRWNDVGIV RKLMTEHGIR
KEPGCSSIEI NGISHEFFAG DTSHPQTKQI YQQLEVIDDR LRSIGYLPDC SQAPLVDATN
DGSKEYSLKL HSERLAIAFG LISLPPQTPI RIFKNLRVCS DCHEVTKLIS KVFNTEIIVR
DRVRFHHFKD GSCSCSDYW
//
