ID R0GJU8_9BRAS Unreviewed; 285 AA.
AC R0GJU8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 31-JUL-2019, entry version 30.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=CARUB_v10005427mg {ECO:0000313|EMBL:EOA17159.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA17159.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W.,
RA Mandakova T., Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S.,
RA Brandvain Y., Coop G., Andolfatto P., Hu T.T., Blanchette M.,
RA Clark R.M., Quesneville H., Nordborg M., Gaut B.S., Lysak M.A.,
RA Jenkins J., Grimwood J., Chapman J., Prochnik S., Shu S., Rokhsar D.,
RA Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid
RT mating system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR EMBL; KB870811; EOA17159.1; -; Genomic_DNA.
DR RefSeq; XP_006284261.1; XM_006284199.1.
DR STRING; 81985.XP_006284261.1; -.
DR GeneID; 17877441; -.
DR KEGG; crb:17877441; -.
DR KO; K09338; -.
DR OrthoDB; 1333079at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR003106; Leu_zip_homeo.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR SMART; SM00340; HALZ; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Complete proteome {ECO:0000313|Proteomes:UP000029121};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 122 182 Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT DNA_BIND 124 183 Homeobox. {ECO:0000256|PROSITE-ProRule:
FT PRU00108}.
FT COILED 188 218 {ECO:0000256|SAM:Coils}.
SQ SEQUENCE 285 AA; 30860 MW; AE3E741FDA97E7A3 CRC64;
MGFDDSCNTG LVLGLGLSPA SNNYNHAIKK ASATVDHRLI RLDPSLTLSL SGESYKTKTL
AGAGDQICRQ TSSHSGISSF SSGRVKRERD VCGGGDGEEE AEETTERVVC SRVSDDHEDE
EGVSARKKLR LTKEQSALLE DSFKIHSTLN PKQKQALARQ LNLRPRQVEV WFQNRRARTK
LKQTEVDCEF LKKCCETLTD ENRRLQKELQ DLKALKLSQP FYMHMPAATL TMCPSCETLG
GGGGGGGGAG GGTAAVVDGE TAKGAFSIVT KPRFFNPFTN PSAAC
//
