ID R0GNU9_9BRAS Unreviewed; 626 AA.
AC R0GNU9;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOA18529.1};
GN ORFNames=CARUB_v10007084mg {ECO:0000313|EMBL:EOA18529.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA18529.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
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DR EMBL; KB870811; EOA18529.1; -; Genomic_DNA.
DR RefSeq; XP_006285631.1; XM_006285569.1.
DR AlphaFoldDB; R0GNU9; -.
DR STRING; 81985.R0GNU9; -.
DR GeneID; 17878639; -.
DR KEGG; crb:17878639; -.
DR eggNOG; ENOG502QUAY; Eukaryota.
DR OrthoDB; 659341at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654:SF42; HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG6; 1.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 41..101
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 169..386
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 43..102
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 141..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..162
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 626 AA; 69805 MW; DD6A25932AAA3025 CRC64;
MDGQGDFNEF GNIFKTILGS TEDEESNIID AMNCDNDGDD GGRMRRSFRH TAFQIQELET
FYEGNPLPTS DQRNELGQRL NLEARQVKFW FQNKRSQEKV NKECLENICL IENNERLLEA
QDELRMLQIS NYGDVDYKAT APEQLPSSSS NPIRNATPQL DSGRGYISAK KDEAKLLELA
NTAMDELKAL GERNCPFWTL DLRNDIVGPP GCAAESSRCI GLVRMGSSTL VKTLMDTGKW
VDVFASIVHV ASAQKLIRPT YSGARSGSLQ QIQAEFQVMS PLVPKRQVTF LRYCKDLGDG
SWVVVDVTDP AEYPTFFPYG ASNRLPSGLI IRDMANGYSE VTWIEQAEYN KNHIHQLYQP
LIASGIGLGA KRWLTTLQRY CESLSTLSAT NMGEIIPGMS AKGANELMKL TKRMTRNYYT
GMTSSTVGKW EMIEVENVAQ NMRFMTRKSL NEPGEYTGIV LSAAISVWFP VNQRTLFAFL
NHLGSRHEWD TLTLTSMEEI FRIQKANRHE NTISLLRVIG DENDMLVLQE VWNDASGAVL
VYAPVETSSI EAVNRGENSN YVPLLPSGFS IVPDGSTGGG CLLTLGLQIL ASTNPTAQLT
QGFVKIVEGL MLHTIDKIKS ALHKQP
//
