ID R0GSM4_9BRAS Unreviewed; 1026 AA.
AC R0GSM4;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=DNA/RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10000123mg {ECO:0000313|EMBL:EOA19874.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA19874.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870810; EOA19874.1; -; Genomic_DNA.
DR RefSeq; XP_006286976.1; XM_006286914.1.
DR AlphaFoldDB; R0GSM4; -.
DR STRING; 81985.R0GSM4; -.
DR eggNOG; KOG2162; Eukaryota.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR018834; DNA/RNA-bd_Est1-type.
DR InterPro; IPR019458; Est1-like_N.
DR InterPro; IPR045153; Est1/Ebs1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR15696:SF35; NONSENSE-MEDIATED MRNA DECAY FACTOR SMG7; 1.
DR PANTHER; PTHR15696; SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7; 1.
DR Pfam; PF10374; EST1; 1.
DR Pfam; PF10373; EST1_DNA_bind; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 65..188
FT /note="Telomerase activating protein Est1-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10374"
FT DOMAIN 201..530
FT /note="DNA/RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF10373"
FT REGION 891..921
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1004..1026
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1026 AA; 112977 MW; 79A90B3E48F16DD3 CRC64;
MDKTTASSPR ERAKAIFDKT VELENKRWKD AQARKQADPN LWQQIRENYE AILLEDHTFS
EQHSIELTLW QLHYKFIEEF RARIHAALSS GSSSAAQNVK GPSRPDRIAA LKLQFRTFIT
EATGFYHGMI LKIRSKYGLP FGYFSEDQES QNLTDNDGKK SAEVKKGLVS CHRCLIYLGD
LARYKGLYGE GDSKIREYTA AKSYYLQAAS LLPASGNPHH QLAIIASYSG DEFAATYRYF
RSLAVESPFP TARDNLIVAF EKNRQSYAQL CVASKDSSKR QTGKGRGKGK DISSKDANLV
AGPEKDKVTS GNEMLKAFCI RFVRLNGILF TRTSLETFLD VLASTSSSLR EVISSSTVEG
LSLGLDTSNS ALFIVRLVAI LIFSVHNSKK ETEGQSYAEI VQRVEPARNS LTASFQLLGH
IIEQCVQLRD PSTSYFLPGI LVFVEWLACC PDIALASDPD DRQTTVRNSF WNQCVTFFNQ
ILLLLGPMFL DDVEDETCFS NMSLYDEGET ENRLALWEDF ELRGFLPLLP AQTILDFSRK
HSFVTEGPKE KKARVKRILA AGKALTSVIK VDDNDVYYDS KKKKFLVGVK PSDDLLDSHS
SPPKADALQD NQVMVNHNSP FIQQDQQIYM GEEDDDDEVI VFKPLVTEKR KTASDQICVS
SGGFRKPDQV ATTGNLKPLS GSDSAFRENQ LLQARGNASI QVPASVDSNL LGLLQASTQS
QAMHLQQVQT QAVNPQAAQS LAAARLQLMQ SQVAHLQPLS SRVVHFQQTQ APVSHVSPVQ
SQSASLVGGT KWLPEEAASL ANTLSSFAQM GNGHVMKNEM HGNHGVSYHP AHSEPAQQSY
NVNGMGGMPY SQSLTPEAVF PPKSDAVSSS GAIADGLGVQ SSLARKNPIS RAFRHLGPPP
GFNSVPSKLQ KEPAPGSDLS GNNLAVDDYS WLDGYQAQSS RGAAALNSSL NYASSGKPEH
MGTSNGMNGA TNFPFPGKQV PTSQVQADFP YFQNPLKESF ANQNHQSAQL PEQYQGQSTW
SSRHFV
//
