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Database: UniProt
Entry: R0GVQ6_9BRAS
LinkDB: R0GVQ6_9BRAS
Original site: R0GVQ6_9BRAS 
ID   R0GVQ6_9BRAS            Unreviewed;       631 AA.
AC   R0GVQ6;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   27-MAR-2024, entry version 34.
DE   RecName: Full=EGF-like calcium-binding domain-containing protein {ECO:0000259|SMART:SM00179};
GN   ORFNames=CARUB_v10008569mg {ECO:0000313|EMBL:EOA39891.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA39891.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA   Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA   Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA   Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA   Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid mating
RT   system evolution.";
RL   Nat. Genet. 45:831-835(2013).
CC   -!- SIMILARITY: Belongs to the VSR (BP-80) family.
CC       {ECO:0000256|ARBA:ARBA00007038}.
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DR   EMBL; KB870805; EOA39891.1; -; Genomic_DNA.
DR   RefSeq; XP_006306993.1; XM_006306931.1.
DR   AlphaFoldDB; R0GVQ6; -.
DR   STRING; 81985.R0GVQ6; -.
DR   GeneID; 17896802; -.
DR   KEGG; crb:17896802; -.
DR   eggNOG; ENOG502QQUF; Eukaryota.
DR   OrthoDB; 305396at2759; -.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   CDD; cd00054; EGF_CA; 1.
DR   Gene3D; 3.50.30.30; -; 1.
DR   Gene3D; 2.10.25.10; Laminin; 2.
DR   InterPro; IPR026823; cEGF.
DR   InterPro; IPR001881; EGF-like_Ca-bd_dom.
DR   InterPro; IPR018097; EGF_Ca-bd_CS.
DR   InterPro; IPR046450; PA_dom_sf.
DR   InterPro; IPR003137; PA_domain.
DR   PANTHER; PTHR22702; PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR22702:SF4; VACUOLAR-SORTING RECEPTOR 6-LIKE; 1.
DR   Pfam; PF12662; cEGF; 1.
DR   Pfam; PF02225; PA; 1.
DR   SMART; SM00179; EGF_CA; 1.
DR   SUPFAM; SSF52025; PA domain; 1.
DR   PROSITE; PS01187; EGF_CA; 1.
PE   3: Inferred from homology;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   EGF-like domain {ECO:0000256|ARBA:ARBA00022536};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   TRANSMEM        562..585
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          513..555
FT                   /note="EGF-like calcium-binding"
FT                   /evidence="ECO:0000259|SMART:SM00179"
FT   REGION          611..631
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   631 AA;  70302 MW;  2FD57B96EDFA6FFA CRC64;
     MSLIHKGATL ALFLALTMVV TGVFGRFIVE KSSVMILNPL AMRSKHDAAI ANFGVPNYGG
     YMIGSVVYAG KGAYGCDSFD KTFKPKFPRP TILIIDRGEC YFALKVWNGQ KSGAAAVLVA
     DNVDEPLITM DSPEESKEAD EFIEKLNIPS ALIDYSFANT LKQALKNGEE VVLKIDWSES
     LPHPDERVEY ELWTNTNDEC GARCDEQMNF IKNFKGHAQI LEKGGYSLFT PHYITWFCPK
     DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
     DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPEANVENE VLKAEQALQV
     GQGDRGDVTI LPTLIINNAQ YRGKLERNAV LKAICSGFKE RTEPGICLSG DVETNECLEA
     NGGCWQDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE
     TKKGLTFSAC SNSETSGCRC PPGFKGDGLK CEDIDECKEQ SACQCDGCKC KNKWGGFECK
     CSGNRLYMKE QDTCIERSGS RIGWFFTFVI LAAVAGICVG GYVFYKYRLR SYMDSEIMAI
     MSQYMPLESQ NTNDPMTGES QQQQLRLTSA A
//
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