ID R0GVQ6_9BRAS Unreviewed; 631 AA.
AC R0GVQ6;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=EGF-like calcium-binding domain-containing protein {ECO:0000259|SMART:SM00179};
GN ORFNames=CARUB_v10008569mg {ECO:0000313|EMBL:EOA39891.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA39891.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the VSR (BP-80) family.
CC {ECO:0000256|ARBA:ARBA00007038}.
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DR EMBL; KB870805; EOA39891.1; -; Genomic_DNA.
DR RefSeq; XP_006306993.1; XM_006306931.1.
DR AlphaFoldDB; R0GVQ6; -.
DR STRING; 81985.R0GVQ6; -.
DR GeneID; 17896802; -.
DR KEGG; crb:17896802; -.
DR eggNOG; ENOG502QQUF; Eukaryota.
DR OrthoDB; 305396at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR CDD; cd00054; EGF_CA; 1.
DR Gene3D; 3.50.30.30; -; 1.
DR Gene3D; 2.10.25.10; Laminin; 2.
DR InterPro; IPR026823; cEGF.
DR InterPro; IPR001881; EGF-like_Ca-bd_dom.
DR InterPro; IPR018097; EGF_Ca-bd_CS.
DR InterPro; IPR046450; PA_dom_sf.
DR InterPro; IPR003137; PA_domain.
DR PANTHER; PTHR22702; PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR22702:SF4; VACUOLAR-SORTING RECEPTOR 6-LIKE; 1.
DR Pfam; PF12662; cEGF; 1.
DR Pfam; PF02225; PA; 1.
DR SMART; SM00179; EGF_CA; 1.
DR SUPFAM; SSF52025; PA domain; 1.
DR PROSITE; PS01187; EGF_CA; 1.
PE 3: Inferred from homology;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW EGF-like domain {ECO:0000256|ARBA:ARBA00022536};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 562..585
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 513..555
FT /note="EGF-like calcium-binding"
FT /evidence="ECO:0000259|SMART:SM00179"
FT REGION 611..631
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 631 AA; 70302 MW; 2FD57B96EDFA6FFA CRC64;
MSLIHKGATL ALFLALTMVV TGVFGRFIVE KSSVMILNPL AMRSKHDAAI ANFGVPNYGG
YMIGSVVYAG KGAYGCDSFD KTFKPKFPRP TILIIDRGEC YFALKVWNGQ KSGAAAVLVA
DNVDEPLITM DSPEESKEAD EFIEKLNIPS ALIDYSFANT LKQALKNGEE VVLKIDWSES
LPHPDERVEY ELWTNTNDEC GARCDEQMNF IKNFKGHAQI LEKGGYSLFT PHYITWFCPK
DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPEANVENE VLKAEQALQV
GQGDRGDVTI LPTLIINNAQ YRGKLERNAV LKAICSGFKE RTEPGICLSG DVETNECLEA
NGGCWQDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE
TKKGLTFSAC SNSETSGCRC PPGFKGDGLK CEDIDECKEQ SACQCDGCKC KNKWGGFECK
CSGNRLYMKE QDTCIERSGS RIGWFFTFVI LAAVAGICVG GYVFYKYRLR SYMDSEIMAI
MSQYMPLESQ NTNDPMTGES QQQQLRLTSA A
//