ID R0GWD3_9BRAS Unreviewed; 299 AA.
AC R0GWD3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=CARUB_v10001577mg {ECO:0000313|EMBL:EOA21229.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA21229.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the histone deacetylase HD2 family.
CC {ECO:0000256|ARBA:ARBA00006673}.
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DR EMBL; KB870810; EOA21229.1; -; Genomic_DNA.
DR RefSeq; XP_006288331.1; XM_006288269.1.
DR AlphaFoldDB; R0GWD3; -.
DR STRING; 81985.R0GWD3; -.
DR GeneID; 17884343; -.
DR eggNOG; ENOG502QVH6; Eukaryota.
DR OrthoDB; 447862at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 2.60.120.340; Nucleoplasmin core domain; 1.
DR InterPro; IPR041232; NPL.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF17800; NPL; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 272..299
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 120..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 139..196
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 210..225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 245..277
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 32489 MW; E601A7AFBBB5496A CRC64;
MEFWGVEVKQ GAPLHVDPGV DMLVHISQAA LGENKNNVNE PIKLYLRVKD KKHIIGVLSH
DKIPQLATEI VLERNFELSH SWKNGSVFFS GYKVDASDPE NENMTDDGLA VASNEAEPAV
AKSGVKQVNF QLPNEDVQAK QDDDDDDSED DSSDDDDDDS SEESGDEEEK TVTAEGDSDE
DDSSDDDEED SSEEDTPIKP EEPKKRSAEA NSSKNTASNK KAKFVTPQKS ESKKPHVHVA
TPHPSKQAGK NSGGSSNGES LKQQQTPKSP SHGCKSCTRS FTSEMALQSH TKAKHSAAA
//
