GenomeNet

Database: UniProt
Entry: R0H3D8_9BRAS
LinkDB: R0H3D8_9BRAS
Original site: R0H3D8_9BRAS 
ID   R0H3D8_9BRAS            Unreviewed;       530 AA.
AC   R0H3D8;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   27-MAR-2024, entry version 30.
DE   RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN   ORFNames=CARUB_v10006438mg {ECO:0000313|EMBL:EOA18003.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA18003.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA   Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA   Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA   Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA   Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid mating
RT   system evolution.";
RL   Nat. Genet. 45:831-835(2013).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KB870811; EOA18003.1; -; Genomic_DNA.
DR   RefSeq; XP_006285105.1; XM_006285043.1.
DR   AlphaFoldDB; R0H3D8; -.
DR   STRING; 81985.R0H3D8; -.
DR   eggNOG; ENOG502QSE3; Eukaryota.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   InterPro; IPR018289; MULE_transposase_dom.
DR   InterPro; IPR006564; Znf_PMZ.
DR   InterPro; IPR007527; Znf_SWIM.
DR   PANTHER; PTHR31973:SF177; MUDR FAMILY TRANSPOSASE; 1.
DR   PANTHER; PTHR31973; POLYPROTEIN, PUTATIVE-RELATED; 1.
DR   Pfam; PF10551; MULE; 1.
DR   Pfam; PF04434; SWIM; 1.
DR   SMART; SM00575; ZnF_PMZ; 1.
DR   PROSITE; PS50966; ZF_SWIM; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT   DOMAIN          423..468
FT                   /note="SWIM-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50966"
SQ   SEQUENCE   530 AA;  61342 MW;  8617B91A44D648DD CRC64;
     MLEVPSYHPC INNVEIYLEI FSSSWLDERE LHVGMLFRDE DKSEKAVKLY SCRRQRMCST
     RQRWFSWASC KASSCEWSLS ADKTKENDFL ITEYRGPHTC EPVDVASDFL AGEIKCLIKA
     QPSLSIAELS KLVKEEFDYT VSHSNWKYDP FPDPKDASFR SLFFAFQQSV EGFPHCRPLI
     LVDTVDLNGK YPGKLLVATG LDAENALFPL AFAIITQESL SADTWRWFFA CIRKKVTQRE
     GLCLITSLNP DIVAVVKEPE CQWVTHRFCL RHLCIKFYDV FNNNLLTEFF CKAGSTSYIS
     SFNYYLKKIK EMNPEARKWL DQIPPHQWAL AHDDEGLRFG ITDTNLIFTT YGFVNNVHDL
     PITTCVLLIF EHLLELFKSR HGLLGESLSR EVYAKHVVKK LEEYKVTSRT YDVLPLDQTR
     ERFQVTEVLR IGNKKSFVHC SDRVCTCGIW QHYKYPCPHM IAVCRRLNID HMQYVNDFYN
     AKSFLGVYAS DFNPLPKVTD WPEASDVPRL FPPGSRPIHQ CPVNDNTATV
//
DBGET integrated database retrieval system