ID R0H488_9BRAS Unreviewed; 438 AA.
AC R0H488;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOA18348.1};
DE Flags: Fragment;
GN ORFNames=CARUB_v10006875mg {ECO:0000313|EMBL:EOA18348.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA18348.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870811; EOA18348.1; -; Genomic_DNA.
DR RefSeq; XP_006285450.1; XM_006285388.1.
DR AlphaFoldDB; R0H488; -.
DR STRING; 81985.R0H488; -.
DR eggNOG; KOG1075; Eukaryota.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR47074; BNAC02G40300D PROTEIN; 1.
DR PANTHER; PTHR47074:SF68; GB|AAF30348.1-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 75..170
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 288..409
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOA18348.1"
SQ SEQUENCE 438 AA; 50756 MW; CCF5F9C6162BE6AD CRC64;
PWIPTTPPHP PQLQNEEEAV LPVRILIDPH TFHWDSHQLH RYIDTHDHHL IQKIFLPQVP
MVDDYLWSYT KDGEYSVKSG YWKALSLQRE EHAPVAPLAT SPDIASTIWQ LNIAPKLKHF
LWRLASRAIG VADNLRRRNI NINPYCSWCC SDFESSEHIF FTCPRVHPIW RMVGVPLTLL
GDPNISLEDK LRYLFRLHND SSLPIFKRTS PFLVLWRLWK TRNNLVFNRK STTTEEVFKY
ICLDTEEWLN HLTPHAPITT TTSKPLSYHA PTRRSKWTPP CQGWVKCNYD ASHHEGNRDS
GLGWIIHDSH GTFLHGGMGR FQGRYTAAEA ECSALLWALQ SSWALGYRSI VFEGDSQTLH
RALHSQTNNP RLRNYVNTIL QWKPMFSSIL FTFQFREQNS CADKLAKSAL LSSQLYALFT
VCPLFLHSSV NNDCTKSF
//
