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Database: UniProt
Entry: R0HA09_9BRAS
LinkDB: R0HA09_9BRAS
Original site: R0HA09_9BRAS 
ID   R0HA09_9BRAS            Unreviewed;       723 AA.
AC   R0HA09;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   31-JUL-2019, entry version 30.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOA26239.1};
DE   Flags: Fragment;
GN   ORFNames=CARUB_v100165770mg {ECO:0000313|EMBL:EOA26239.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA26239.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W.,
RA   Mandakova T., Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S.,
RA   Brandvain Y., Coop G., Andolfatto P., Hu T.T., Blanchette M.,
RA   Clark R.M., Quesneville H., Nordborg M., Gaut B.S., Lysak M.A.,
RA   Jenkins J., Grimwood J., Chapman J., Prochnik S., Shu S., Rokhsar D.,
RA   Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid
RT   mating system evolution.";
RL   Nat. Genet. 45:831-835(2013).
RN   [2] {ECO:0000313|EMBL:EOA26239.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Schmutz J., Prochnik S., Nordborg M., Weigel D., Rokhsar D.,
RA   Wright S.;
RT   "Genome sequencing of Capsella rubella.";
RL   Nat. Genet. 0:0-0(2013).
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DR   EMBL; KB870809; EOA26239.1; -; Genomic_DNA.
DR   EMBL; KB870809; EOA26240.1; -; Genomic_DNA.
DR   RefSeq; XP_006293341.1; XM_006293279.1.
DR   RefSeq; XP_006293342.1; XM_006293280.1.
DR   STRING; 81985.XP_006293341.1; -.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR   GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00593; RIBOc; 2.
DR   Gene3D; 1.10.1520.10; -; 1.
DR   InterPro; IPR003100; PAZ_dom.
DR   InterPro; IPR036085; PAZ_dom_sf.
DR   InterPro; IPR000999; RNase_III_dom.
DR   InterPro; IPR036389; RNase_III_sf.
DR   Pfam; PF02170; PAZ; 1.
DR   Pfam; PF00636; Ribonuclease_3; 2.
DR   SMART; SM00535; RIBOc; 2.
DR   SUPFAM; SSF101690; SSF101690; 1.
DR   SUPFAM; SSF69065; SSF69065; 2.
DR   PROSITE; PS50821; PAZ; 1.
DR   PROSITE; PS00517; RNASE_3_1; 1.
DR   PROSITE; PS50142; RNASE_3_2; 2.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000029121};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW   RNA-mediated gene silencing {ECO:0000256|SAAS:SAAS00703041}.
FT   DOMAIN        1     82       PAZ. {ECO:0000259|PROSITE:PS50821}.
FT   DOMAIN      133    305       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   DOMAIN      346    488       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   REGION      587    609       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   NON_TER       1      1       {ECO:0000313|EMBL:EOA26239.1}.
SQ   SEQUENCE   723 AA;  81339 MW;  DCBBDAD160EB85C7 CRC64;
     LVVIAIHTGR IYSIVEAVTA SSAMSPFEGD VSSEYATYVE YFNKKYGIVL AHPNQPLMKL
     KQSHHAHNLL VDFNEEMVVK TEPKAGTVRK KKPNIHAHLP PELLVRIDVP RAVVKSIYLL
     PSVMYRLESL MLASQLREEI DCSINNFSIS STSILQALTT LTCPEAFSME RLELLGDSVL
     KYVVSCYLFL KYPDKDEGQL SRQRQSIISN SNLHSVATNR KLQGYIRNGA FEPRRWTAPG
     QVSLFPVPCK CGVETREVPL DPKFFTENMT IKIGKACDMG HRWTVSKSVS DCAEALIGAY
     YVSGGLTASL HMMKWLGVDV DFDQNLVIEA INRASLRCYI PKDNELTELE RKIQHEFSAK
     FLLKEAITHS SVHESYSYER LEFLGDSVLD FLITRHLFNT YEQTGPGEMT DLRSACVNNE
     NFAQVAVKNN LHSHLQRRAT VLETQINEYL MSFPKPDETG RSIPSIQGPK ALGDLVESIA
     GALLIDTRLD LDQVWRIFEP MLSPLVTPDK LQLPPYRELN ELCDSLGYFF RVKCSNDGVK
     AQATIQLQLD DVLLTGDGSE QTNKLALGKA ALHLLRQLEK RNISRKTSIG DNQSSMAVNL
     DGETPAPDSN EIQSIVIPVI GPINMKKGGP RGTLHEFCKK YLWPMPTFDT SEEKSRTPFE
     FTDSGEKRTS FSSFISTITL RIPNREAVMY AGEARPDKKS SFDSAVVELL YELERRKILT
     IQK
//
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