ID R0HD93_9BRAS Unreviewed; 274 AA.
AC R0HD93;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
DE Flags: Fragment;
GN ORFNames=CARUB_v10003737mg {ECO:0000313|EMBL:EOA22990.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA22990.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
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DR EMBL; KB870810; EOA22990.1; -; Genomic_DNA.
DR RefSeq; XP_006290092.1; XM_006290030.1.
DR AlphaFoldDB; R0HD93; -.
DR STRING; 81985.R0HD93; -.
DR GeneID; 17881671; -.
DR KEGG; crb:17881671; -.
DR eggNOG; KOG2572; Eukaryota.
DR OrthoDB; 5489581at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0031428; C:box C/D RNP complex; IEA:InterPro.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0030515; F:snoRNA binding; IEA:InterPro.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR PANTHER; PTHR10894:SF1; NUCLEOLAR PROTEIN 58; 1.
DR Pfam; PF01798; Nop; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 150..268
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOA22990.1"
SQ SEQUENCE 274 AA; 30126 MW; 3EA4E96B6F9631AA CRC64;
SNMSLGLSKS LAGYKLDFSS DEKVETLVIK AIGQLDDLDK QLNNYARSVR EWYTLHFPEL
ARIVHDQILY AKAVKLMGDR TNAAKLDFSE ILSDEDEAKL KEAAVTSTGS TEVMSELDFT
HIDELCDHVL SLSEYKLQLH DFLKSRMNTI APNLTALVGE MVGARLISRG GSLLKLSKLP
GSKIQILGAE KALRRALRTN HNTPKYGVMY NAPLVAQATP KCKAKIARSL AAKAALAVRC
DALGDGQDNT VGVQCRLKVL FSIFPLLLKD SSYI
//
