ID R0HPZ8_9BRAS Unreviewed; 880 AA.
AC R0HPZ8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10015076mg {ECO:0000313|EMBL:EOA31849.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA31849.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KB870807; EOA31849.1; -; Genomic_DNA.
DR RefSeq; XP_006298951.1; XM_006298889.1.
DR AlphaFoldDB; R0HPZ8; -.
DR STRING; 81985.R0HPZ8; -.
DR GeneID; 17890907; -.
DR KEGG; crb:17890907; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 1107090at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 12.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 229..263
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 265..299
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 300..334
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 335..369
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 370..404
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 405..439
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 440..474
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 475..509
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 510..544
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 580..614
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 615..649
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 650..684
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 880 AA; 97981 MW; 8355B5345FCF4B90 CRC64;
MLIRNRSPRK ILALGRLVFP SSNAFFSVSS PLSQFSPDEM APHDVASLLK ISNWEKNSSL
KSLVSHMNPH VASQVISHQR SDNDICVRFF MWVCKHSSYC FEPAQKTQLL KLIVSSGMYR
VAHDVIVLLI RECSRCEKEM LNLMGCFDEL RILFGFRLNY PCYSSLLMSL AKLDLGFLAY
VTFRRMEADG FVVGMIDYRT IINALCKNGF TDAAEMFLCK FLKIGFLLDS HICTSLLLGF
CRGLNIRDAL TVFDVMSREG NCAPNSVSYS ILIHGMCEVG RLEEAFGLKD QMGEKGCHPS
TRTYTVLIKA LCDRGLIDGA FSMFDEMTAR GCKPNAHTYT VLIDGLCRDG KIKEANGVFR
NMVKDGIFPS IITYNALING YCKDGLVVPA FELLTVMEKR ACKPNVRTFN ELMEGLCRVG
KPYKAVHLLK RMVDNGLSPD IVSYNILIDG LCREGHMSMA YKLLNVMNSF DLEPDCLTYT
AIINAFCKQG KADVASGFLG LMLRKGINLD EVTGTTLIDG FCKVGKTRSA LYILETLLKM
RILTTPHSLN VLLDMLSKGC KVKEELAMFG KINKLGLVPS VVTYTTLVDG LIRSGDISGS
FRMVELMKLS GCLPNVYPYT IIINGLCQLG RVEEAEKLLS AMQDSGILPN HVTYTVMVKG
YVDNGRLDCA IDTVRAMVER GYELNDRIYF SLLRGHVLSR KGIDNSDESS VSDIALRETD
PECISELISV VEQLGGSTSG LCIFLVTRIC KEGRTDESND LVQTILKSGV FLEKAVDIIM
ESYCSKKKHS KCLELITLVL KSGFVPSFKS FCLVVQGLKK EGDTERAREV VMELLTSNGV
VEKAEVLPYV ECLMEGDETG GCDEVIDLVD ELHCRERPTF
//
