ID R0HRR2_9BRAS Unreviewed; 679 AA.
AC R0HRR2;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=CARUB_v10022772mg {ECO:0000313|EMBL:EOA26688.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA26688.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/BELL homeobox family.
CC {ECO:0000256|ARBA:ARBA00006454}.
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DR EMBL; KB870808; EOA26688.1; -; Genomic_DNA.
DR RefSeq; XP_006293790.1; XM_006293728.1.
DR AlphaFoldDB; R0HRR2; -.
DR STRING; 81985.R0HRR2; -.
DR eggNOG; KOG0773; Eukaryota.
DR OrthoDB; 3180467at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR006563; POX_dom.
DR PANTHER; PTHR11850:SF327; BEL1-LIKE HOMEODOMAIN PROTEIN 1; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF07526; POX; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00574; POX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 383..446
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 385..447
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 35..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 123..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 221..254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 457..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 265..292
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 123..157
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 679 AA; 74078 MW; D0C4ECB66551A295 CRC64;
MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQADDD SNNNNNNSNN NNNNNNNTNT
NNSSFVFLDS HAPPPNASQQ FVGIPLSGHE AASITAADNI SVLHGYPPRV QYSLYGSHQV
DPTHQQAACE TPRAQQGLSL TLSSQQQQQQ QHHHQQHQPI HVGFGSGPGE DIRVGSGSTG
SGVTNGIANL VSSKYLKAAQ ELLDEVVNAD SDDINAKSQL FSSKKGSSGN DKAVGESSAG
AGGEGSGGGG EAAGKRTVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK
FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL RAWLFEHFLH PYPKDSDKHM
LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQG KNMGSMEKTP LDQSNEDSAS
KSTSNQEKSP MADTYHMNPN HNGDLEGVTG IQGSPKRLRT SEETMMQPIN ADFSSNEKLT
MKILEERQGI RSDGGYPFMG NFGQYQMDEM SRFDVVSDQE LMAQRYSGNN NGVSLTLGLP
HCDNLSSTHH QGFMQTHHGI PIGRRVKIGE TEEYGAAAIN GGGSAATAHS SAAAAAAYNG
MNIQNQKRYV AQLLPDFVA
//
