GenomeNet

Database: UniProt
Entry: R0HRX8_9BRAS
LinkDB: R0HRX8_9BRAS
Original site: R0HRX8_9BRAS 
ID   R0HRX8_9BRAS            Unreviewed;       272 AA.
AC   R0HRX8;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 51.
DE   RecName: Full=Homeobox-leucine zipper protein {ECO:0000256|RuleBase:RU369038};
DE   AltName: Full=HD-ZIP protein {ECO:0000256|RuleBase:RU369038};
DE   AltName: Full=Homeodomain transcription factor {ECO:0000256|RuleBase:RU369038};
GN   ORFNames=CARUB_v10015805mg {ECO:0000313|EMBL:EOA32524.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA32524.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA   Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA   Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA   Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA   Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid mating
RT   system evolution.";
RL   Nat. Genet. 45:831-835(2013).
CC   -!- FUNCTION: Transcription factor. {ECO:0000256|RuleBase:RU369038}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class I subfamily.
CC       {ECO:0000256|ARBA:ARBA00025748, ECO:0000256|RuleBase:RU369038}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KB870807; EOA32524.1; -; Genomic_DNA.
DR   RefSeq; XP_006299626.1; XM_006299564.1.
DR   AlphaFoldDB; R0HRX8; -.
DR   STRING; 81985.R0HRX8; -.
DR   GeneID; 17892753; -.
DR   KEGG; crb:17892753; -.
DR   eggNOG; KOG0483; Eukaryota.
DR   OrthoDB; 3042435at2759; -.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:UniProtKB-UniRule.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR045224; HDZip_class_I_plant.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   PANTHER; PTHR24326; HOMEOBOX-LEUCINE ZIPPER PROTEIN; 1.
DR   PANTHER; PTHR24326:SF497; HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5; 1.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW   Transcription {ECO:0000256|RuleBase:RU369038};
KW   Transcription regulation {ECO:0000256|RuleBase:RU369038}.
FT   DOMAIN          64..124
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DNA_BIND        66..125
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          162..187
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   272 AA;  31194 MW;  2AB09366F7CA574C CRC64;
     MESNSFFFDP SASQHGNMFF LGNLNPVVQG GARSMMMMNM EETSKRRPFF SSPEDLYDEE
     YYDDQLPEKK RRLTTEQVHL LEKSFETENK LEPERKTQLA KKLGLQPRQV AVWFQNRRAR
     WKTKQLERDY DLLKSTYDHL LSNYDSIVKD NDKLRSEVTS LTQKLQGKEE ETTAKEPPGQ
     VPDSNLLDPV YINPAAIKTE DRLSSGSVGS AVLDEDAPQL LDSCDSYFPS IVPIHSQQDD
     SDHDRTCFSD VFVPTTSPSH HHGESLGLWG WP
//
DBGET integrated database retrieval system