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Database: UniProt
Entry: R0HU11_9BRAS
LinkDB: R0HU11_9BRAS
Original site: R0HU11_9BRAS 
ID   R0HU11_9BRAS            Unreviewed;       311 AA.
AC   R0HU11;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   31-JUL-2019, entry version 36.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=CARUB_v10023682mg {ECO:0000313|EMBL:EOA27543.1};
OS   Capsella rubella.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Capsella.
OX   NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA27543.1, ECO:0000313|Proteomes:UP000029121};
RN   [1] {ECO:0000313|Proteomes:UP000029121}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX   PubMed=23749190; DOI=10.1038/ng.2669;
RA   Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA   Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W.,
RA   Mandakova T., Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S.,
RA   Brandvain Y., Coop G., Andolfatto P., Hu T.T., Blanchette M.,
RA   Clark R.M., Quesneville H., Nordborg M., Gaut B.S., Lysak M.A.,
RA   Jenkins J., Grimwood J., Chapman J., Prochnik S., Shu S., Rokhsar D.,
RA   Schmutz J., Weigel D., Wright S.I.;
RT   "The Capsella rubella genome and the genomic consequences of rapid
RT   mating system evolution.";
RL   Nat. Genet. 45:831-835(2013).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
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DR   EMBL; KB870808; EOA27543.1; -; Genomic_DNA.
DR   RefSeq; XP_006294645.1; XM_006294583.1.
DR   STRING; 81985.XP_006294645.1; -.
DR   GeneID; 17889296; -.
DR   KEGG; crb:17889296; -.
DR   KO; K09338; -.
DR   OrthoDB; 1135658at2759; -.
DR   Proteomes; UP000029121; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000029121};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT   DOMAIN       58    118       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     60    119       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION        1     33       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      159    208       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED      131    158       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS      1     28       Polar. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS    178    192       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
SQ   SEQUENCE   311 AA;  35163 MW;  0E5087B291CA3EA6 CRC64;
     MKRLSSSSSD SVGGLISLCP TTSTDEQSPR RYGGREFQSM LEGYEEEEEA IVEERGHVGL
     SEKKRRLSIN QVKALEKNFE LENKLEPERK VKLAQELGLQ PRQVAVWFQN RRARWKTKQL
     EKDYGVLKTQ FDSLRHNFDS LRRDNESLLQ EISKLKTKLY GGGEEEEEEN NEAAEATESD
     ISVKEEEVSL PEKITEPPSS PPQFLEHSDG LNYRSFTDLR ELLPLKAAAS SFAAAGSSDS
     SDSSALLNEE SSSNVTVAAP VTVPVGNFFK FVKMEQTEDH DDFLSGEEAC EFFSDEQPPS
     LHWYSTVDHW N
//
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