ID R0I6R5_9BRAS Unreviewed; 476 AA.
AC R0I6R5;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};
GN ORFNames=CARUB_v10019965mg {ECO:0000313|EMBL:EOA33770.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA33770.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KB870806; EOA33770.1; -; Genomic_DNA.
DR RefSeq; XP_006300872.1; XM_006300810.1.
DR AlphaFoldDB; R0I6R5; -.
DR STRING; 81985.R0I6R5; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd11451; bHLH_AtTT8_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR46266:SF10; TRANSCRIPTION FACTOR EGL1; 1.
DR PANTHER; PTHR46266; TRANSCRIPTION FACTOR TT8; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 280..329
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT COILED 319..346
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 476 AA; 53084 MW; 56AA46593FB8D821 CRC64;
MSFVFNIGEG IPGGALTNGE PIWLCNAETA DSKVFTRSLL AKSASLQTVV CFPFLGGVLE
IGTTEHITED LNVIQCVKTL FLEAPPYPTI STRSDYQEVF DPLSDDKYIP VFGTEAFPTP
STSGFEQEPE DHDSFINDGG ASQVQSWQFV GEELSNCVHQ SLNSSDCVSQ TFVGPSGRVA
CDPRKSTVQR LGQIQEQGNH VNMDDDVHYQ GVISTIFKTT HQLILGPQFQ NFDKRSSFTR
WKRSSSVKTL GETSQKMIKK ILFEVPLMNK KEELLTDTPE ETGNHALCEK KRREKLNERF
MTLRSIIPSI SKIDKVSILD DTIEYLQELQ KRVQELESCR ESADTETRMT MMKRKKPEDE
DERASANCMN SKRKGSDVNV VGEDEPVSTG YAGLTDNLRI SSVGNEVVIE LRCAWREGIL
LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TRGMIQEALQ KVAWIC
//
