ID R0IGC2_9BRAS Unreviewed; 507 AA.
AC R0IGC2;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=TTF-type domain-containing protein {ECO:0000259|SMART:SM00597};
GN ORFNames=CARUB_v10011287mg {ECO:0000313|EMBL:EOA37400.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA37400.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870805; EOA37400.1; -; Genomic_DNA.
DR RefSeq; XP_006304502.1; XM_006304440.1.
DR AlphaFoldDB; R0IGC2; -.
DR eggNOG; ENOG502QSU3; Eukaryota.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR025398; DUF4371.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR006580; Znf_TTF.
DR PANTHER; PTHR11697; GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR11697:SF230; ZINC FINGER, MYM DOMAIN-CONTAINING 1; 1.
DR Pfam; PF14291; DUF4371; 1.
DR SMART; SM00597; ZnF_TTF; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 392..412
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 32..126
FT /note="TTF-type"
FT /evidence="ECO:0000259|SMART:SM00597"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 507 AA; 58690 MW; EEECBB27528929F7 CRC64;
MEKYFPKKST ATSHTDLENL PSDPAYRKKI LEYHPNERDE FDLYADWLEY SVKKGKAYCL
FCYLFGDYTE NKGGSDEFVT KGFDTWKNPK RLSDHVGSVN SFHNNALKMA DNLMRQGHDE
SVESANMGNF IELVKYTAEQ NELVSKVVLE NAPKNNQMVF HKIQTDIVHY FREEVIESVI
QEVHHDVFCS LVDESADVST KEQVTVVFLF VDKDGIVKEI FISVIYVPET SSATLKCAID
SLFAKRGLRM KKLRGQGYDG ASNMKGEFNG LRYLTLRENS SAYYVHCFAH QLQLVVVAVA
KKHFEVGDFF DMISVLLNVV GASCKRKYMV REDQRKIIEE GISRGEIKTG KGLNQELSFQ
RPMLEYVESE GTDGIKRRQA NGLLKYFHTF DFVFYLQLML LLLGLTNSLL VAPQRKDQDI
LNAMSLVKST KQQLYNLREN RWNSVFEKVN SFCENNKTEL IIMEEEFVDP KKPRRRSNIT
NLHHYQVECS YSDWICKFKS LMIVLTR
//
