ID R0IPK3_9BRAS Unreviewed; 794 AA.
AC R0IPK3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10011829mg {ECO:0000313|EMBL:EOA39093.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA39093.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KB870805; EOA39093.1; -; Genomic_DNA.
DR RefSeq; XP_006306195.1; XM_006306133.1.
DR AlphaFoldDB; R0IPK3; -.
DR STRING; 81985.R0IPK3; -.
DR GeneID; 17897581; -.
DR KEGG; crb:17897581; -.
DR eggNOG; ENOG502QVPW; Eukaryota.
DR OrthoDB; 1018355at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR46598; BNAC05G43320D PROTEIN; 1.
DR PANTHER; PTHR46598:SF1; OS10G0422566 PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 496..530
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 531..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 638..672
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 794 AA; 89328 MW; 33C78A82E9ED5364 CRC64;
MFSWRKTKLQ AVSLHQSRLT SLFRGMLPLD AIEVTVTISQ ASLQHGLAGN THLYKAGNPI
VLSTLRSSTT FHVWSVHRTE AFSTISGSIL LQARDPAKLN EEIQIAVDEH RCDEVWRLFV
KHMQMEGFPR KSVVNNVLVC FAESLDSNWL QKGYSLVEQA YEESKQNLLE KEPLVYLSLA
LAKSGMAVPA STILRKLVET EEYPHVSSWS AVLAHMSLEG SGSYLSAELV LEIGYLFQNN
RVDPRKKSNA SLLAMKPNTQ ALNIALAGCL LFGTTRKAEQ LLDMIPKIGV KADANLLVIM
AHIYERNGRR EELRKLQRHI DEACNLNDSQ FWQFYNCLLM CHLKFGDLQS ASKMVLEMLR
RGKVARNSLG AAILGFDTAD DDRLNLKKVS GKVSEVKEHD DPDIKVGSIH SMIPYDEFSR
DRKFLKLEAE AKDILDALLA KLHVQVKLIT SKHGVLQPTE EIYVKLAKAF LESGKMKELA
EFLLKAEHED SPVSSDNSML VNVINACISL GMLDQAHDLL DEMRMAGVRT GSLVYSLLLK
AYCKTNRTRE VTSLLRDAQK AGIQLDSSCY EALIQSQVIQ NDTHGALNVF KEMKEAKIPR
GGNQQFEKLL KGCEGNAEAG LMSKLLREIR EGQSLDAGVH DWNNVIHFFS KKGLMQDAEK
ALTRMRSLGH SPNAQTFHSM VTGYAAIGSK YTEVTELWGE MKSIAAATSV MRFDQELLDA
VLYTFVRGGF FSRANEVVEM MEKKNMFVDK YKYRMLFLKY HKTAYKGKAP KVQSESQLKK
REAGLIFKKW LGLS
//
