ID R0JXB3_ANAPL Unreviewed; 508 AA.
AC R0JXB3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Polypyrimidine tract-binding protein 2 {ECO:0000313|EMBL:EOB01892.1};
DE Flags: Fragment;
GN ORFNames=Anapl_05986 {ECO:0000313|EMBL:EOB01892.1};
OS Anas platyrhynchos (Mallard) (Anas boschas).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC Anatinae; Anas.
OX NCBI_TaxID=8839 {ECO:0000313|EMBL:EOB01892.1, ECO:0000313|Proteomes:UP000296049};
RN [1] {ECO:0000313|Proteomes:UP000296049}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23749191; DOI=10.1038/ng.2657;
RA Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., Gan S.,
RA Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., Fairley S.,
RA Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., Lee T.,
RA Kim K.W., Sheng Z., An Y., Searle S., Herrero J., Groenen M.A.,
RA Crooijmans R.P., Faraut T., Cai Q., Webster R.G., Aldridge J.R.,
RA Warren W.C., Bartschat S., Kehr S., Marz M., Stadler P.F., Smith J.,
RA Kraus R.H., Zhao Y., Ren L., Fei J., Morisson M., Kaiser P., Griffin D.K.,
RA Rao M., Pitel F., Wang J., Li N.;
RT "The duck genome and transcriptome provide insight into an avian influenza
RT virus reservoir species.";
RL Nat. Genet. 45:776-783(2013).
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DR EMBL; KB743021; EOB01892.1; -; Genomic_DNA.
DR AlphaFoldDB; R0JXB3; -.
DR Proteomes; UP000296049; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12778; RRM1_PTBP2; 1.
DR CDD; cd12783; RRM2_PTBP2; 1.
DR CDD; cd12696; RRM3_PTBP2; 1.
DR CDD; cd12702; RRM4_PTBP2; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035002; PTBP2_RRM1.
DR InterPro; IPR034799; PTBP2_RRM3.
DR InterPro; IPR034800; PTBP2_RRM4.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF16; POLYPYRIMIDINE TRACT-BINDING PROTEIN 2; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000296049};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 22..96
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 144..220
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 314..388
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 431..506
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOB01892.1"
FT NON_TER 508
FT /evidence="ECO:0000313|EMBL:EOB01892.1"
SQ SEQUENCE 508 AA; 55333 MW; 95AE2B363628BF29 CRC64;
SANGNDNKKF KGDDKMDGAP SRVLHIRKLP GEVTETEVIA LGLPFGKVTN ILMLKGKNQA
FLELATEEAA ITMVNYYSAV TPHLRNQPIY IQYSNHKELK TDNTLNQRAQ AVLQAVTAVQ
ATNAPISGTT VSESAVTPAQ SPVLRIIIDN MYYPVTLDVL HQIFSKFGAV LKIITFTKNN
QFQALLQYGD PVNAQQAKLA LDGQNIYNAC CTLRIDFSKL VNLNVKYNND KSRDYTRPDL
PSGDGQPALD PAIAAAFAKE TSLLGMTLAL YFWLPVAAVP GALSPLAIPN AAAAAAAAAA
GRVGMPGVSA GGNTVLLVSN LNEEMVTPQS LFTLFGVYGD VQRVKILYNK KDSALIQMAD
GNQSQLAMSH LNGQKMYGKI IRVTLSKHQT VQLPREGLDD QGLTKDFGNS PLHRFKKPGS
KNFQNIFPPS ATLHLSNIPP SVAEEDLRTL FANTGGTVKA FKFFQRDHKM ALLQMSTVEE
AIQALIDLHN YNLGENHHLR VSFSKSTI
//
