GenomeNet

Database: UniProt
Entry: R0LUN7_ANAPL
LinkDB: R0LUN7_ANAPL
Original site: R0LUN7_ANAPL 
ID   R0LUN7_ANAPL            Unreviewed;       345 AA.
AC   R0LUN7;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   SubName: Full=PDZ and LIM domain protein 1 {ECO:0000313|EMBL:EOB04148.1};
DE   Flags: Fragment;
GN   ORFNames=Anapl_00119 {ECO:0000313|EMBL:EOB04148.1};
OS   Anas platyrhynchos (Mallard) (Anas boschas).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC   Anatinae; Anas.
OX   NCBI_TaxID=8839 {ECO:0000313|EMBL:EOB04148.1, ECO:0000313|Proteomes:UP000296049};
RN   [1] {ECO:0000313|Proteomes:UP000296049}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23749191; DOI=10.1038/ng.2657;
RA   Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., Gan S.,
RA   Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., Fairley S.,
RA   Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., Lee T.,
RA   Kim K.W., Sheng Z., An Y., Searle S., Herrero J., Groenen M.A.,
RA   Crooijmans R.P., Faraut T., Cai Q., Webster R.G., Aldridge J.R.,
RA   Warren W.C., Bartschat S., Kehr S., Marz M., Stadler P.F., Smith J.,
RA   Kraus R.H., Zhao Y., Ren L., Fei J., Morisson M., Kaiser P., Griffin D.K.,
RA   Rao M., Pitel F., Wang J., Li N.;
RT   "The duck genome and transcriptome provide insight into an avian influenza
RT   virus reservoir species.";
RL   Nat. Genet. 45:776-783(2013).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, myofibril, sarcomere, Z line
CC       {ECO:0000256|ARBA:ARBA00004216}.
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DR   EMBL; KB742808; EOB04148.1; -; Genomic_DNA.
DR   AlphaFoldDB; R0LUN7; -.
DR   Proteomes; UP000296049; Unassembled WGS sequence.
DR   GO; GO:0030018; C:Z disc; IEA:UniProtKB-SubCell.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd09448; LIM_CLP36; 1.
DR   CDD; cd00992; PDZ_signaling; 1.
DR   Gene3D; 2.30.42.10; -; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR   InterPro; IPR031847; PDLI1-4/Zasp-like_mid.
DR   InterPro; IPR028537; PDLIM1_LIM.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR006643; Zasp-like_motif.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR24214:SF5; PDZ AND LIM DOMAIN PROTEIN 1; 1.
DR   PANTHER; PTHR24214; PDZ AND LIM DOMAIN PROTEIN ZASP; 1.
DR   Pfam; PF15936; DUF4749; 1.
DR   Pfam; PF00412; LIM; 1.
DR   Pfam; PF00595; PDZ; 1.
DR   SMART; SM00132; LIM; 1.
DR   SMART; SM00228; PDZ; 1.
DR   SMART; SM00735; ZM; 1.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 2.
DR   SUPFAM; SSF50156; PDZ domain-like; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR   PROSITE; PS50106; PDZ; 1.
PE   4: Predicted;
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW   ProRule:PRU00125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00125}; Reference proteome {ECO:0000313|Proteomes:UP000296049};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00125}.
FT   DOMAIN          1..57
FT                   /note="PDZ"
FT                   /evidence="ECO:0000259|PROSITE:PS50106"
FT   DOMAIN          274..333
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EOB04148.1"
FT   NON_TER         345
FT                   /evidence="ECO:0000313|EMBL:EOB04148.1"
SQ   SEQUENCE   345 AA;  37847 MW;  6ACC03525D9CB1CC CRC64;
     VFSQVTPGSK AATANLCIGD QIIAIDGVNT DNMTHLEAQN KIKGCADELT LTVSRTESKV
     WSPLVNEEGK THPYKMNLAS QPQVRSWFNP KSSLSGQRQQ QTWHPGAGLR GAGSVSCGVG
     MKLMLFPSSQ VRVGPEQLKH AAQVCPKSPV EVEVPGLKVL HVQFNSPLQL YSQSNILDSL
     QGQISSVSPD FPSLDQHNQP PGSIVIDRES EVYKMLQENQ ESHEPPRQSA SFLVLQEILE
     SEEKGDPTKP SGFRSVKAPT TKVASSIGNA QKLPMCDKCG SGIVGVFVKI RDKQRHPECY
     VCSDCGTNLK QKGHFFVEDQ IYCEKHARER VVPPEGYEVV TVFPK
//
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