ID R0M1K6_ANAPL Unreviewed; 493 AA.
AC R0M1K6;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Lumican {ECO:0000256|ARBA:ARBA00013370};
DE Flags: Fragment;
GN ORFNames=Anapl_08574 {ECO:0000313|EMBL:EOB06578.1};
OS Anas platyrhynchos (Mallard) (Anas boschas).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC Anatinae; Anas.
OX NCBI_TaxID=8839 {ECO:0000313|EMBL:EOB06578.1, ECO:0000313|Proteomes:UP000296049};
RN [1] {ECO:0000313|Proteomes:UP000296049}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23749191; DOI=10.1038/ng.2657;
RA Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., Gan S.,
RA Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., Fairley S.,
RA Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., Lee T.,
RA Kim K.W., Sheng Z., An Y., Searle S., Herrero J., Groenen M.A.,
RA Crooijmans R.P., Faraut T., Cai Q., Webster R.G., Aldridge J.R.,
RA Warren W.C., Bartschat S., Kehr S., Marz M., Stadler P.F., Smith J.,
RA Kraus R.H., Zhao Y., Ren L., Fei J., Morisson M., Kaiser P., Griffin D.K.,
RA Rao M., Pitel F., Wang J., Li N.;
RT "The duck genome and transcriptome provide insight into an avian influenza
RT virus reservoir species.";
RL Nat. Genet. 45:776-783(2013).
CC -!- SUBUNIT: Binds to laminin. {ECO:0000256|ARBA:ARBA00011719}.
CC -!- SIMILARITY: Belongs to the small leucine-rich proteoglycan (SLRP)
CC family. SLRP class II subfamily. {ECO:0000256|ARBA:ARBA00005818}.
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DR EMBL; KB742595; EOB06578.1; -; Genomic_DNA.
DR AlphaFoldDB; R0M1K6; -.
DR Proteomes; UP000296049; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 4.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR026906; LRR_5.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR PANTHER; PTHR45712; AGAP008170-PA; 1.
DR PANTHER; PTHR45712:SF6; LUMICAN; 1.
DR Pfam; PF13306; LRR_5; 1.
DR Pfam; PF13855; LRR_8; 4.
DR Pfam; PF01462; LRRNT; 2.
DR PRINTS; PR00019; LEURICHRPT.
DR SMART; SM00364; LRR_BAC; 10.
DR SMART; SM00368; LRR_RI; 4.
DR SMART; SM00365; LRR_SD22; 7.
DR SMART; SM00369; LRR_TYP; 12.
DR SMART; SM00013; LRRNT; 2.
DR SUPFAM; SSF52058; L domain-like; 2.
DR PROSITE; PS51450; LRR; 2.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00022974};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Proteoglycan {ECO:0000256|ARBA:ARBA00022974};
KW Reference proteome {ECO:0000313|Proteomes:UP000296049};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Sulfation {ECO:0000256|ARBA:ARBA00022641}.
FT DOMAIN 6..40
FT /note="LRRNT"
FT /evidence="ECO:0000259|SMART:SM00013"
FT DOMAIN 275..309
FT /note="LRRNT"
FT /evidence="ECO:0000259|SMART:SM00013"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOB06578.1"
FT NON_TER 493
FT /evidence="ECO:0000313|EMBL:EOB06578.1"
SQ SEQUENCE 493 AA; 55839 MW; 87EED4A7663023B5 CRC64;
GPSSAVCAPE CNCPLSYPTA MYCDNLKLKT IPIVPSGIKY LYLRNNMIEG IEENTFDNVT
DLQWLILDHN HLENSKIKGR VFSKLKHLKK LHINYNNLTE AVGPLPKTLD DLQLSHNKIT
KVNPSALEGL ANLTVIHLQN NQLKADSISG AFKGLNSLLY LDLSFNRLTK LPTGLPHSLL
MLYFDNNQIS NIPDEYFQGF KTLQYLRLSH NKLTDSGIPG NVFNITSLVE LDLSFNQLKS
IPTVSENLEN FYLQVNKINI YDDLDPEHWS HYTSECPQEC FCPPSFPNAL YCDNKGLKEI
PAIPARIWYL YLQNNLIETI SDKPFVNATH LRWINLNKNK ITNSGIESGV LSKLKRLLYL
FLEDNELEEV PAPLPVGLEQ LRLARNKISR IPEGVFSNLE NLTMLDLHQN NLLDSALQSD
TFQGLNSLMQ LNIAKNSLKK MPLSIPANTL QLFLDNNSIE VIPENYFSAI PKVTFLRLNY
NKLSDDGIPP NGF
//