ID R1DQK9_EMIHU Unreviewed; 590 AA.
AC R1DQK9;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Bromo domain-containing protein {ECO:0000259|PROSITE:PS50014};
GN ORFNames=EMIHUDRAFT_454889 {ECO:0000313|EMBL:EOD37352.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD37352.1};
RN [1] {ECO:0000313|EMBL:EOD37352.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD37352.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD37352}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB864100; EOD37352.1; -; Genomic_DNA.
DR RefSeq; XP_005789781.1; XM_005789724.1.
DR STRING; 2903.R1DQK9; -.
DR PaxDb; 2903-EOD37352; -.
DR EnsemblProtists; EOD37352; EOD37352; EMIHUDRAFT_454889.
DR GeneID; 17282622; -.
DR KEGG; ehx:EMIHUDRAFT_454889; -.
DR eggNOG; KOG1474; Eukaryota.
DR HOGENOM; CLU_462674_0_0_1; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR CDD; cd04369; Bromodomain; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 4.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR PANTHER; PTHR45926:SF6; HOMEOTIC PROTEIN FEMALE STERILE-RELATED; 1.
DR PANTHER; PTHR45926; OSJNBA0053K19.4 PROTEIN; 1.
DR Pfam; PF00439; Bromodomain; 4.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 4.
DR SUPFAM; SSF47370; Bromodomain; 4.
DR PROSITE; PS50014; BROMODOMAIN_2; 4.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Reference proteome {ECO:0000313|Proteomes:UP000013827}.
FT DOMAIN 31..103
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 153..225
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 313..385
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 400..472
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 257..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 590 AA; 64541 MW; B47C36703F7804C3 CRC64;
MSTYSRPQVP AGSCGAISLR LAGRDLLKPI SKMDQAFYFL QPVDVVALRI PDYPTIVREP
MDLGTIEKKL DASSYATTEE FVADVKLVWY NARLYNPVGS VVHEAARALE KAFDDRLEAL
VGSCDRPAPP APDSDAADGV PASKLRPLLR SLQSHARSKP FRVPVDYVAL NLPHYPTIIT
QPMDLATVSS NLERGRYGTV ADLRRDIDLI WQNAIDFNGP TSWIGADAST LREHTKRKFS
QSGFADTAAI ALDAAAPPPA APARKRAPAP PAAARPAGRS GAAGGASAAA GAVEADSFEM
TLGQCRSLLR PFLQMPQARD FLAPVDPVAL NIPDYPTVIT HPMDLGTVEQ RLDRKEYTDA
GGFVRDMRLV WSNAITAAPP PPRPRALPAA TYLKEEATGE AARVRAMYKK AVNWKKLKLW
EYPSIITQPM DLGTVFKKLD RGEYSTAEAM KADVELVWAN ALRFNGADSW IAKPVSECRD
LAEAKFRHAE ATFESAQNAP AGGDERSLNG AVTNPSGTAI VTPQMRLHFW FNAKRLRSSE
MLEVQRMVKK CCPAALVPLN SGDIKIDVDA LDFRSFMRLD VHVRSVLVQR
//
