ID R1EM52_EMIHU Unreviewed; 650 AA.
AC R1EM52;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Excinuclease ABC subunit B, UvrABC system protein B {ECO:0000313|EMBL:EOD27740.1};
DE Flags: Fragment;
GN ORFNames=EMIHUDRAFT_204685 {ECO:0000313|EMBL:EOD27740.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD27740.1};
RN [1] {ECO:0000313|EMBL:EOD27740.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD27740.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD27740}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KB865021; EOD27740.1; -; Genomic_DNA.
DR RefSeq; XP_005780169.1; XM_005780112.1.
DR STRING; 2903.R1EM52; -.
DR PaxDb; 2903-EOD27740; -.
DR EnsemblProtists; EOD27740; EOD27740; EMIHUDRAFT_204685.
DR GeneID; 17273286; -.
DR KEGG; ehx:EMIHUDRAFT_204685; -.
DR eggNOG; ENOG502QQZA; Eukaryota.
DR HOGENOM; CLU_421890_0_0_1; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR Gene3D; 3.30.420.340; UvrC, RNAse H endonuclease domain; 1.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR InterPro; IPR004807; UvrB.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR PANTHER; PTHR24029; UVRABC SYSTEM PROTEIN B; 1.
DR PANTHER; PTHR24029:SF0; UVRABC SYSTEM PROTEIN B; 1.
DR Pfam; PF04851; ResIII; 1.
DR Pfam; PF02037; SAP; 1.
DR Pfam; PF08459; UvrC_RNaseH_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000013827}.
FT DOMAIN 348..474
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 539..573
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT NON_TER 650
FT /evidence="ECO:0000313|EMBL:EOD27740.1"
SQ SEQUENCE 650 AA; 69610 MW; FE198A8E424D4F0E CRC64;
MRTRPIPASK QSRYLRDTSR AVEALVLSAW YATTGTGLAQ PISQLQVQLP TLQEGASSQQ
PAMAAPVLAE VLDAVRSNPR PEELRAAMSE GIRQAVWKVD GLRGLSSLLG LEEVPARLET
WDISHLQLSS ALDALSELGV RRGVAALALA KREEEIYLPG ASEPLVLPRS SPTLTLLRRQ
RDEAHAYALL SHRRLRASAE LASVLDGCGL TAAEQSALRA SFGSASALRA ASVDELRSAL
GEGCAADPRL VSARLRSRPE PVAVGFHDSL AGYGSAVQAL ALSSRRMGSK VEAWASEEQA
RRWWAARRGV WLSRLERGGP AAERAVDDLR APYRPSGDQP SAIDSLVADV QSGVPRVVLK
GATGTGKTFV LANLIARTNR PTLIVAPNKV LAAQLYTELR SFFPTNAVTI FFSHFDFYRP
ESYAPVSQNY VEKASQTNPK IDALRHEATR SLFERRDTIV VATVSCIYGL GMPAEYLDRA
TALSVGQRWR AADLLAALRE MRYERAAGRQ LGRGEYRDAA TGGSLPPPSE AGAEAGAEAL
IQAVAALKEA CAERGLATGG VKAALRERLL SHEALLVAAG EAGGEAGERG DAGAAGDGEV
PAHVVLYPAN HYTEHKERVL REIAAECAST VRSLLASGLV VEAERLQLRT
//
