ID R1F243_EMIHU Unreviewed; 1824 AA.
AC R1F243;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=PDZ domain-containing protein {ECO:0000259|PROSITE:PS50106};
GN ORFNames=EMIHUDRAFT_463011 {ECO:0000313|EMBL:EOD29296.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD29296.1};
RN [1] {ECO:0000313|EMBL:EOD29296.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD29296.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD29296}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB864838; EOD29296.1; -; Genomic_DNA.
DR RefSeq; XP_005781725.1; XM_005781668.1.
DR STRING; 2903.R1F243; -.
DR PaxDb; 2903-EOD29296; -.
DR EnsemblProtists; EOD29296; EOD29296; EMIHUDRAFT_463011.
DR GeneID; 19046645; -.
DR KEGG; ehx:EMIHUDRAFT_463011; -.
DR HOGENOM; CLU_237541_0_0_1; -.
DR OMA; VEQTHAT; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR CDD; cd00992; PDZ_signaling; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR PANTHER; PTHR14063; PROTEIN LIN-7 HOMOLOG; 1.
DR PANTHER; PTHR14063:SF2; PROTEIN LIN-7 HOMOLOG; 1.
DR Pfam; PF00595; PDZ; 1.
DR SMART; SM00228; PDZ; 2.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50106; PDZ; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000013827}.
FT DOMAIN 679..759
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 810..892
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT REGION 199..414
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 583..629
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 758..804
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 920..1299
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1371..1393
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1633..1672
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1700..1824
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1482..1509
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 203..234
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..286
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..609
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1041..1058
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1074..1089
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1204..1221
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1375..1389
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1759..1793
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1824 AA; 182440 MW; E98F03CA954F4F0B CRC64;
MAGRGGMDPR LDPRRELYLP AAFDGAYVLP DGRYGQAVPQ YGPGGSCIGG SQPMMHAVVH
PPQQRMSRVR LQDAAGKDIS MDDLRDGGDG VGCDGAVEAA EAVAGDAAAA GMWQVAPGAM
APMGMVPPMA PPFLGYMPGM QRWQHMEMGA AMHPGMQHHA YVPMAAHGRG FEPPGGYQHS
QAQAGHLADA GLPGYGRPMA EWNQPLYPPP LPQDDGVRPH ALPPRPPPAE RPEASSADAP
PRVDLGAARP DHPRVGALSG ADPSTLARAA ALSASPQHSV SAGSGGASPV GASPAGGALP
GGLPGGGSPL TPMHPGLAAI PSPAVSPALA RAPAAHPSLR PPPGTPQDMT ESLRALGLEP
SPADETAASA AAARRLPAAP APEGGKDVLV AAGAPPAKPA HSGMPVPDVA HVPQLAGRPT
APHIAREALS APAAAARGAA AAAPTPAPAA GVIGACVSSD PAFPPAGQHL LWDELGGEGR
AAALELGWER VSWNCGERAR ACATRWRALP VGQRRAASVL GYGEESWDAE LAADITMRQR
AVAQSAAPQS DAAARREADA VSSPTMLGAI RTAHATYANH SLAHPSAEPA AGRDADTPSR
QRDAGLARDP SPPEEALSQG EGENGAQEAV GAPRCAARAA EASASKCVDG AVGEVAVAAA
GRSVASDGTR AQRARADRVV VLHKPTRDAK LGITLKGGGG SPTEVVSLQP QSVAAASGGL
AVGDALLSVN GTSVTSHESA TAMLRAAKGE VRLRVVPSRG TTATASDSPP PPPAAAAKQG
AATPSRSAQP LESGRPGDPA TSGEPLRLVT VRLSKDDAAA VAGGLRLVGH AGRPPYVAQL
SGSAAAVAAS VGVAVGQALV SVNGRTVSSA AEGSAMLAAA VAGVTLVLED EEGEEVRAGG
RSGAPGGVVA DGVAAGGSAA GDVAAKAPKE KPRRPSGNGA ATEEAAKATK GKPAPPQSTG
AAGGPKGSKG KPTPPPPSHT SGAAEGRPRQ PESTGTALAA AAAVEPRVQA TPPKGAAAGD
GKGGAKGGSK GGGSKGGSKD KPTLQPPQGT SSGAATDAAG TQEPDKKQSK PPSKSKGVAG
TSTLSTPVSA PAARPGVAAP ADKANAAAAN GGANGGANGN NGGANGGAAA KGKPASAGKA
AGKAAGKTRA AAATSAAPAK PDREAAPTAS AASPAAAVAA AAATRATPLA TKTRAAAKPS
GATAVPTPPR PDEPPLVTLP PPSFSDGRES VPGMADLFDC DEALEPTPLP PGSPEDAPSP
GRFAFKDPPP SREEVEAQQG APAEAADGGD AGRGGSLVPE RMLGVAERLR LLDSKDDAQE
MARLGSLDLM GMTAQVRDIE QVALEMARDE GRDDFRVRAL LRNISGLSPD EALAAERHSQ
QESERSELTR ASPAHAQIYT AQQRLQSIMG LPQCARASSQ ESTDSLGGVH TTGGGDDGCA
QMVATSGESC AAAEAERATA GMGAAPVVQR SANSLAAKLA SQQQQQQRLS DLRARRLALE
GRLDQLSADP VQQQASVERL HYGQPSGLQY VSAADPHGAR RGGYGSFGAG CGSGPCAGGC
YPPGYGDSVG FTAAGSGYAQ AVGSSGSCMA PPVNTAPGYA PSQMAATYAA ARQVWQQAQP
QQAQQQQQQQ AQQQQQQQQA HPGMTLDQIQ ARQQHQAQQA RAQRQQAQQQ AQQLAQQHAQ
TLQLQRAEAE LARRSQAAQA LKQGLAPQQY GLPPQAVTSQ PLGWRPPSPY PPSSQAGFSA
QGQHAALSPA ASPRPSPHAA PQNLATGTVP TCSSAARPTG VASAFSLTSG APSSYPPPRQ
PSGQGQPPLL PGQMQPHPTM RYDG
//
